Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0138 ATGAACGAGATATTTCCTGATACAAATCAGCTTACCATCTTCTATAACGGGAATATTTGTAGCTATAACGGAATTCCAGCAGAAAAGATGCAAGGAATAATGCTCCTGGTTGCTGCTGCCGCCAAGTCTACGGAAGCGAAGAATACCATGAAACAATCTCTTTTTCCTTCACCGATTCCTTCAAGCCCACCTTCTCCAGTTGCTGCTGCTGATAATGTCACTTCACCGCAGGCACTCTGCTTTCCTTATCCGTCTTTGCCGAAAAATGAAGGTGGCTGA 279 0.4444 MNEIFPDTNQLTIFYNGNICSYNGIPAEKMQGIMLLVAAAAKSTEAKNTMKQSLFPSPIPSSPPSPVAAADNVTSPQALCFPYPSLPKNEGG* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0138 92 Pfam tify domain 7 37 IPR010399 -
Psa5g0138 92 ProSiteProfiles Tify domain profile. 4 39 IPR010399 -
Psa5g0138 92 PANTHER DIVERGENT CCT MOTIF PROTEIN 2 79 - -
Psa5g0138 92 SMART tify_2 4 39 IPR010399 -
Psa5g0138 92 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 2 79 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0138 Psa-Chr5 8064038 8064393 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0138 9 82 Tify Gene Family AT5G20900 41.892 2.64e-10 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Psa5g0138 tify 1.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0138 K13464 - gmx:100306045 80.4925