Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0130 ATGGCTTCTTCAAGTGGAACATCTTCAGGCTATTCAACGCTTCCAAACTCAGGTTCAGAGGAAGATTTGATGCTTCTAATGGATCAAAGAAAAAGAAAGAGAATGATATCGAATCGCGAATCGGCAAGGCGATCTCGAATGAGGAAACAAAAACACCTAGATGATCTTGCTCTTCAAGTAAGTCAACTAAGGAATGAGAATCAACAGATTGTAACATCTGTGAATCTCACAACTCAACGTTTCTTGGCTGTTGAATCTGAGAACTCAGTGCTTAGAGCTCAATTGAATGAACTCAACAACAGATTTGAGTCTTTGAATGAGATCATCAACTTCATGAATGTTACAAATGGTGTTTTTGAACCTGTTAGTGTTGATAATGACAATAACAACTACTTCAATAACCCTTTGAATATGGCTTATTTGAATCAACCAATCATGGCTTCTGCAGATATGAACATGATGCATTATTGA 471 0.3694 MASSSGTSSGYSTLPNSGSEEDLMLLMDQRKRKRMISNRESARRSRMRKQKHLDDLALQVSQLRNENQQIVTSVNLTTQRFLAVESENSVLRAQLNELNNRFESLNEIINFMNVTNGVFEPVSVDNDNNNYFNNPLNMAYLNQPIMASADMNMMHY* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0130 156 SUPERFAMILY Leucine zipper domain 30 81 IPR046347 GO:0003700|GO:0006355
Psa5g0130 156 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Psa5g0130 156 PANTHER BZIP TRANSCRIPTION FACTOR 1 152 - -
Psa5g0130 156 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Psa5g0130 156 MobiDBLite consensus disorder prediction 1 19 - -
Psa5g0130 156 Pfam bZIP transcription factor 30 71 IPR004827 GO:0003700|GO:0006355
Psa5g0130 156 Coils Coil 81 115 - -
Psa5g0130 156 MobiDBLite consensus disorder prediction 1 21 - -
Psa5g0130 156 Gene3D - 28 83 - -
Psa5g0130 156 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 152 - -
Psa5g0130 156 Coils Coil 46 66 - -
Psa5g0130 156 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Psa5g0130 156 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0130 Psa-Chr5 7644287 7645775 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0130 26 150 bZIP Transcription Factor Family AT4G34590 57.895 3.99e-46 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa5g0130 bZIP_1 7.2e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0130 K25786 - pop:7470005 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0130 5 7644287 7645775 Psa5g0130 5 7644287 7645775 ECH