Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0118 ATGGCTTTTGTTGCATTATCACAAATTCATTTTGTACTCATTTCAATAACACTTGCTTTATGTCTTTGCTTGCTCACAACACTAACATATTTTTGGTGGATTTTACCTAACCATAAACTTCAAAACCTTAAGAAATGTGGATTTGATGGGCCAACACCAAGTTTTCCATTTGGAAACATCAAAGAAATGAAAAGGAATTCTTCTTTTTCTTCTTCACTTGATATCACTCATAATATTCACTCTACCGTTTCTCCTTATTATTATTCTTGGCAAAAATCTTTTGGGAAAGTTTTCGTTTATTGGTTGGGGGCAGAACCATTTTTATACGTTGCAGATCCTGAATTCTTGAAGAAAATGTCTGGAAAAGTTATGGCGAAGAAATGGGGGAAACCAAGTGTTTTTAGAAAAGATAGAAAAGCAATGTTTGGAAATGGTTTGGTGATGGCTGAAGGCAGCATATGGGTACATCATCGACATGTTATAGCCCCAACATTTACTCCAATTAATCTTAAGACAATGGCAAGCATGATGGTAGATTCAACAAAGAAAATGATCAATAGGTGGAATTTCCAAATTAACTCCGACCACCTTGAGCTCGACATCGAAAGCGAGATTGTAGCATCGGCCGGAGAGATCATAGCAAGAGCAAGCTTTGGAATGGATGACGAAAATGGAAAAATAGTTTTTGATCAACTAAGAACTTTGCAAATGACTCTTTTTAAGACCAATAGATATGTGGGGGTCCCCTTTGGAAAATTCTTTAATTTAAAGAAAACTTTAGAAGCCAAGAAAATTGGTGAAGAAGTTGACAAGCTCTTGTTATCTATTATAGAAAGTAGGATGAATTCAAATGATAAGAAACAACATGAACAAGATTTGTTGGGTCATTTGTTGAAAGAAAATAACGAGATTGATGGACAAACGAACAAGGCATTAACAAAAAAGGAATTGGTTGATGAGTGCAAGACATTTTTCTTTGGTGGCTATGAGACAACATCATTATCAATCACATGGACTTTGTTACTTCTAGCATTGCATCAAGATTGGCAAAACCAATTGAGAGATGAAATTAAACAAGTTGTAGGAAATATTGAAGAACTTGATATCAACTTGCTTGCTGATTTAAAGAAGATGAAATGGGTGATGAATGAAGCACTTAGACTCTACCCACCATCTCCAAATGTTCAAAGGCAAACAATGGAGGATATTCAAGTAGATAATGTAAAGGTGCCTAAAGGGACCAACATTTGGATTGATGTTGTAGCAATGCATCATGATGTTACATTATGGGGGAATGATGCCAACAAGTTCAAACCAGAGAGATTTATGAATGATGCAAATGGGGAATGCAAGCACAAAATGGGATACTTGCCTTTTGGTTTTGGAGGAAGAGCATGTGTTGGTAGGAACTTGACTTTCATGGAGTATAAGATAGTGTTAACCCTACTTCTTTCTAAGTTTAGGTTTAAACTCTCCCCTAGTTATTACCATTCTCCTACTATCATGTTGTCTCTTAGACCTAGTTATGGACTTCCTCTCATAGTTCAACCATTGTAG 1557 0.3584 MAFVALSQIHFVLISITLALCLCLLTTLTYFWWILPNHKLQNLKKCGFDGPTPSFPFGNIKEMKRNSSFSSSLDITHNIHSTVSPYYYSWQKSFGKVFVYWLGAEPFLYVADPEFLKKMSGKVMAKKWGKPSVFRKDRKAMFGNGLVMAEGSIWVHHRHVIAPTFTPINLKTMASMMVDSTKKMINRWNFQINSDHLELDIESEIVASAGEIIARASFGMDDENGKIVFDQLRTLQMTLFKTNRYVGVPFGKFFNLKKTLEAKKIGEEVDKLLLSIIESRMNSNDKKQHEQDLLGHLLKENNEIDGQTNKALTKKELVDECKTFFFGGYETTSLSITWTLLLLALHQDWQNQLRDEIKQVVGNIEELDINLLADLKKMKWVMNEALRLYPPSPNVQRQTMEDIQVDNVKVPKGTNIWIDVVAMHHDVTLWGNDANKFKPERFMNDANGECKHKMGYLPFGFGGRACVGRNLTFMEYKIVLTLLLSKFRFKLSPSYYHSPTIMLSLRPSYGLPLIVQPL* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0118 518 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 11 513 - -
Psa5g0118 518 Gene3D Cytochrome P450 31 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0118 518 Pfam Cytochrome P450 86 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0118 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Psa5g0118 518 SUPERFAMILY Cytochrome P450 78 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0118 518 Coils Coil 350 370 - -
Psa5g0118 518 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0118 518 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0118 518 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0118 518 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0118 518 PANTHER CYTOCHROME P450 FAMILY MEMBER 11 513 - -
Psa5g0118 518 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0118 518 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0118 518 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0118 518 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0118 518 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0118 Psa-Chr5 6433461 6445346 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0118 1 518 Cytochrome P450 AT5G52400 54.442 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0118 - - mtr:MTR_0025s0110 849.736