Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0092 ATGGCTTCAAACTCTGCTCTCTCTTCCTCCTCCCTCGCCAACCCCAAACTCTCTTTCTCTTCTTTTTCTTCTTCTTCTTCCTCTTTCAACCCTTCTTTTTTCCCTAACAAACTTCTTTTCTCAAACTCAAACTCAAACTCCAAAACCACACTTTCTCATTCCCGCAACTACAAATCACTCTCCTCATCCAACAACACCAACCCTAACACCACAAACACATTCCCTTTCCTAAACCTAACCGCCAACGACGACGAAAAGCCTCGCGAAGAATGCGGCGTCGTCGGTATCTACGGCGACCCCGAAGCCTCTCGCTTATGTTATCTAGCTCTCCACGCTCTTCAACACCGTGGTCAAGAAGGTGCTGGAATTGTCTCCGTCAATAATAACATCCTTCAAACCGTTACCGGCGTCGGTCTCGTTTCCGAAGTTTTTAACGATACCAAACTCCGTCAATTACCGGGAACTTTGGCCATCGGTCATGTTCGTTACTCAACCGCAGGTCAATCTATGCTGAAAAACGTTCAACCTTTTGTTGCAGGTTACCGTTTTGGTTCAGTTGGTGTTGCTCATAATGGTAACTTCGTGAATTACCGTTCCTTGAGAAACAAGCTTGAAGATTCTGGTTCCATTTTTAATACTACTTCTGATACTGAGGTTATTCTTCATCTTATTGCAACTTCGAATCAGAAGAGTTTTATAACTAGAGTTATTGATGCTTGTGAGAAAGTGCAAGGTGCTTACTCGCTTGTGTTTGTTACCGAGGATAAACTTGTTGCTGTGAGAGATCCTTACGGTTTTCGACCTTTGGTTATGGGAAGAAGAACGAATGGTTCTGTTGTTTTTGCTTCGGAAACCTGTGCGCTTGATTTGATTGAAGCTAGTTATGTGAGAGAGGTTTATCCTGGCGAAATTGTGGTTGTGGATGAAACTGGTGTTCAATCTTATTCTCTTGTTTTTCATCCAGAGCCAAAACAATGTATTTTTGAACATATTTATTTCTCACTGCCAAATTCTGTTGTTTTTGGGAAATCTGTTTATGAATCGAGGAGATTGTTTGGTGAAATATTGGCTACTGAGAATCCTGTTGATTGTGATGTTGTTATCGCTGTTCCTGATTCTGGTGTTGTAGCTGCACTTGGCTATGCTGCAAAAGCTGGTGTACCTTTTCAGCAGGGTTTGATTAGGTCACACTACGTTGGAAGAACTTTCATTGAGCCGTCGCAGAAGATTAGAGATTTTGGTGTGAAATTGAAGCTTTCCCCGGTTCGCGCGGTTCTTGAAGGGAAAAGAGTTGTGGTTGTTGATGATTCTATTGTGAGAGGAACAACATCATCCAAAATTGTGAGGCTGTTGAAAGAAGCTGGTGCTAAAGAGGTTCATATGAGAATTGCATGTCCACCAATTATTGGATCATGTTATTATGGTGTGGATACACCTAGCCCTGATGAGTTGATATCTAATAGGATGAGTGTGGATGAGATTAAGGAGTTTATTGGTTGTGATTCACTTGCTTTCTTACCTATGGATAGTTTGAAGAAGCTGTTGGGTGATGATTCTTCTAATTTCTGTTATGCTTGTTTCACTGGGAATTATCCTGTTGAACCTCTTGAACTTAAAGTCAAGAAGAAGGCAGTGGATGGTGGATTAAATGGAACTGTTCAAGCTATCCCAAATCAGAAAGAGGTGAAGATTGTTGGAGTTTGA 1704 0.4161 MASNSALSSSSLANPKLSFSSFSSSSSSFNPSFFPNKLLFSNSNSNSKTTLSHSRNYKSLSSSNNTNPNTTNTFPFLNLTANDDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVSVNNNILQTVTGVGLVSEVFNDTKLRQLPGTLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNFVNYRSLRNKLEDSGSIFNTTSDTEVILHLIATSNQKSFITRVIDACEKVQGAYSLVFVTEDKLVAVRDPYGFRPLVMGRRTNGSVVFASETCALDLIEASYVREVYPGEIVVVDETGVQSYSLVFHPEPKQCIFEHIYFSLPNSVVFGKSVYESRRLFGEILATENPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIACPPIIGSCYYGVDTPSPDELISNRMSVDEIKEFIGCDSLAFLPMDSLKKLLGDDSSNFCYACFTGNYPVEPLELKVKKKAVDGGLNGTVQAIPNQKEVKIVGV* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0092 567 Hamap Amidophosphoribosyltransferase [purF]. 90 531 IPR005854 GO:0004044|GO:0009113
Psa5g0092 567 Pfam Glutamine amidotransferase domain 169 288 IPR017932 -
Psa5g0092 567 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 91 332 IPR029055 -
Psa5g0092 567 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 91 310 IPR017932 -
Psa5g0092 567 CDD PRTases_typeI 348 486 IPR000836 -
Psa5g0092 567 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 53 556 - -
Psa5g0092 567 SUPERFAMILY PRTase-like 326 537 IPR029057 -
Psa5g0092 567 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 53 556 - -
Psa5g0092 567 Pfam Phosphoribosyl transferase domain 348 461 IPR000836 -
Psa5g0092 567 Gene3D - 350 514 IPR029057 -
Psa5g0092 567 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 91 532 IPR029055 -
Psa5g0092 567 CDD GPATase_N 91 341 IPR035584 -
Psa5g0092 567 MobiDBLite consensus disorder prediction 52 72 - -
Psa5g0092 567 TIGRFAM purF: amidophosphoribosyltransferase 91 532 IPR005854 GO:0004044|GO:0009113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0092 Psa-Chr5 5111863 5114323 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0092 75 556 PRT Gene Family AT2G16570 80.247 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0092 K00764 - gmx:100791919 832.017