Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0083 ATGGTGCTGATTGTTCTTCATGTAAACCCTCTCAAGTTGATTTTGTTACTTTCTACTCTCTATACTTTATCAGATTGCTATGACCCTTTGGATCCAAATGGGAACTTTTCTATAACTTTTGACATTAACAACCGTTTGGACAATGGATATCTGGCAACGGTGACACTTCAAAATTATCATCAGTATCGGCACGTAGACAAACCAGGGTGGAAACTGGGATGGACATGGGCTAGCAATGAGGTGATATGGTCAATGAGTGGTGCAATTGCAACTGATAGAGGTGATTGTTCATCTTACAGTGGCTCTCAGATGCCACATTCATGCAAGAAAGATCCTATCATAGTTGATATATCTCCGGACGTCACACAAAACAGGTCCGCCCGTTGCTGTCGCGGTGGCCGCCTCTCTGCCCGAGCTATCGATTCTCTCAGTTCATTAACTTCATTTGAACTTGAAGTAAGAAACTTGGACCAAAAAGAAAATTCAATTGGACAAGCACCTAAGAATGTTACATTCATGGCACCGGGTCCTGGTTACACTTGTAGCCCTTTTATGGTTACCGATCCCTCGGTGTCCTTAGATTTAGGAGGAGTAAGACAAGTTCCAGTTATAAGAACTTGGAAGTCAATATGTACATATTCAAGTTTCTTGGCCAACAAGTCACCAGTATGTTGTGCTTCCTTCTCAACCTTTTACAATCCTATCATCACGCCGTGTCGTAATTGCACTTGTGGCGGATGCAGGGAAGCCGATAAAAACACACAGTCTTGCATAAGGCCAAGTGATTCTTTGGGGGGATCGAATGATGAGAAAAACATAATCCGATGCACGAACCACATGTGTCCAATTCGAGTCCATTGGCATTTCAAGAACAACTATATGAACCAATGGAGGGTGAAGCTTACGATTTCGAACTACAATTTCAATAGAAACTACTCGAATTGGAACGTCCTAGTTCAACATCCCGGTTTCAACGAAAAAGCAACAGCTTACAGCTTCAACAGCACTAAACTTCCCACTCTTGTGGCAGATGGAGTTGCACTTTTTTGGGGAATAGATTATTTCAACAATGAATTATTGCATTCTGATAAGGATGGAGTAGGTTCTGTTACAACAGAGATACTATTGGAAAAAGATCAGAACTCATTCACGTTGCAAAATGGATGGACATTTCCAAGAAGAATATATTTCAATGGTGAAAACTGTGACATGCCTTTACCAGACACATTTCCTATGTTACCAAATGATAGTTACATTTTTAGACCAAATTGTCTTGCTTTTATTTTTTCATTAATTTCTTTGTTACTTGTCCTATTAGTACTATAG 1326 0.402 MVLIVLHVNPLKLILLLSTLYTLSDCYDPLDPNGNFSITFDINNRLDNGYLATVTLQNYHQYRHVDKPGWKLGWTWASNEVIWSMSGAIATDRGDCSSYSGSQMPHSCKKDPIIVDISPDVTQNRSARCCRGGRLSARAIDSLSSLTSFELEVRNLDQKENSIGQAPKNVTFMAPGPGYTCSPFMVTDPSVSLDLGGVRQVPVIRTWKSICTYSSFLANKSPVCCASFSTFYNPIITPCRNCTCGGCREADKNTQSCIRPSDSLGGSNDEKNIIRCTNHMCPIRVHWHFKNNYMNQWRVKLTISNYNFNRNYSNWNVLVQHPGFNEKATAYSFNSTKLPTLVADGVALFWGIDYFNNELLHSDKDGVGSVTTEILLEKDQNSFTLQNGWTFPRRIYFNGENCDMPLPDTFPMLPNDSYIFRPNCLAFIFSLISLLLVLLVL* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0083 441 PIRSF COBRA 1 441 IPR006918 GO:0010215|GO:0031225
Psa5g0083 441 Pfam COBRA-like protein 50 214 IPR006918 GO:0010215|GO:0031225
Psa5g0083 441 PANTHER PROTEIN COBRA 12 435 IPR006918 GO:0010215|GO:0031225
Psa5g0083 441 PANTHER COBRA-LIKE PROTEIN 12 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0083 Psa-Chr5 4019848 4021639 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0083 25 441 COBRA Gene Family AT3G29810 45.412 8.82e-134 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0083 - - ccaj:109801855 653.669