Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0081 ATGTCATCTCTTATCTCATGGCCCCATCATTTTAACAATCATTTTTCTCTACCAAAGGGATTTGAAGAAACTCTTGGAAACTATAAATGTAGTTGTCCTTCTTCACAACAATCACAAATAATTCAAGCAATCATACTTCGAAACATTTTTCTTACATCTGACAAATTCAGCTTGTCCTTCAAAAGATTTAAAATGGGTTTCCGTTTACCTGCAGCTATTAGACGAGCTTCATTTAGCAGTAGCCAGACATCCTCAAAAGCGTTGAATGTGCCAAAGGGCTATCTTGCGGTGTACGTTGGAAAGCAAATGAAGCGGTTTGTTATCCCCATGTCATACTTGAACCAATCTTCATTTCAAAATTTGTTGAGTCAAGCAGAGGAAGAGTTCGGATATGATCATCCAATGGGTGGCCTCACAATTCCTTGCACGGAAGATGTTTTCTTGCATATTACTTCTCGCTTCAACGGCCAATAG 474 0.3882 MSSLISWPHHFNNHFSLPKGFEETLGNYKCSCPSSQQSQIIQAIILRNIFLTSDKFSLSFKRFKMGFRLPAAIRRASFSSSQTSSKALNVPKGYLAVYVGKQMKRFVIPMSYLNQSSFQNLLSQAEEEFGYDHPMGGLTIPCTEDVFLHITSRFNGQ* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0081 157 Pfam Auxin responsive protein 74 152 IPR003676 GO:0009733
Psa5g0081 157 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 65 156 IPR003676 GO:0009733
Psa5g0081 157 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 65 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0081 Psa-Chr5 3927384 3933909 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0081 79 150 Calmodulin-binding Proteins AT3G43120 48.611 4.76e-20 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0081 K14488 - gmx:100787155 144.436