Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0069 ATGCCTCCGAAAATAAAGTGTAGGCTTCACCTCGGCACTAAGAATGGTGACTTCCAAATGGAGCGTTACATTTTTAAACGCCGAAATGACGGGATTTACATCATAAATCTTGGGAAGACATGGGAGAAGCTCCAACTTGCCGCAAGGGTTATTATTGCGATTGAGAATCCTCAGGACATTATTGTCCAATCTACTAGGCCTTATGGACAGAAAGTTGTTCTCAATTTCCCTCAGTATACAGGAGCTCATGCTATTGCTGGAAGGCACACTCCTGGAACCTTCACCAATCAGCTTCAAACTTCCTTTAGTGAGCCCCGTCTTCTCATCCTCACCGATCCAGAACCCCTGTGA 351 0.453 MPPKIKCRLHLGTKNGDFQMERYIFKRRNDGIYIINLGKTWEKLQLAARVIIAIENPQDIIVQSTRPYGQKVVLNFPQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPEPL* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0069 116 Pfam Ribosomal protein S2 8 99 IPR001865 GO:0003735|GO:0005840|GO:0006412
Psa5g0069 116 PANTHER 40S RIBOSOMAL PROTEIN SA 7 113 - -
Psa5g0069 116 Gene3D - 4 115 - -
Psa5g0069 116 PRINTS Ribosomal protein S2 signature 1 19 IPR001865 GO:0003735|GO:0005840|GO:0006412
Psa5g0069 116 PRINTS Ribosomal protein S2 signature 31 40 IPR001865 GO:0003735|GO:0005840|GO:0006412
Psa5g0069 116 PRINTS Ribosomal protein S2 signature 80 97 IPR001865 GO:0003735|GO:0005840|GO:0006412
Psa5g0069 116 PRINTS Ribosomal protein S2 signature 105 116 IPR001865 GO:0003735|GO:0005840|GO:0006412
Psa5g0069 116 PANTHER 40S RIBOSOMAL PROTEIN SA 7 113 IPR005707 GO:0003735|GO:0006412|GO:0015935
Psa5g0069 116 CDD RPS2 5 113 IPR001865 GO:0003735|GO:0005840|GO:0006412
Psa5g0069 116 SUPERFAMILY Ribosomal protein S2 6 113 IPR023591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0069 Psa-Chr5 3405479 3406014 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0069 7 113 Cytoplasmic Ribosomal Protein Gene Family AT1G72370 84.112 6.46e-65 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0069 K02998 - gmx:548014 201.06