Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0066 ATGTCAAGTAACGAAGACGACCTCGATCTTCTCCTTTCTCTTCAAGACAAAGTTCCCGAAACCCCTCCTGCTTCTCCTTCACCGCTTGATTTTGATGGTGATGACGATGTTGTACCGCAGAGGGAGAGACCTGATATGTCCGTTTTCAAAGATGCAGTTCAGGATTGCCTTCTCGACCAACCCCCTAACCCTAACCCTAACCCTAAACCTAAACCATACAATAAATCACTCGGCGACGATCCCCAACTTGACAAGTTCTCGGGTCTTCGCATAAGGGATCAATGTTTAACACCAGCTGAGCTTAGGGAATCTGTTCAAGACATTCGTTTTGTTCGCCTACCGGTCATCAAGAATTTGGTGAATGGGGATATTTCTCTGGAAATTGGGAATTGCCAAGAAGGCAGGAACGTCTTTGCATTCTTCAATTGTGGTGTTCGCAAGGATGCCAAGGGTAATGGTTTTTCTTTGAGTATATACTCCCCTAACCAAATTGTGAAGATGGGCACCTCTGTAGATTACGGAGTTTGCAAAGCGAAAGAGCGGGATGGGATGGCATGTACAATGGCCATAAATAAGCGTCAGGGGGCTTATTGTAAATATCATAAATCAAAAACATCAGAGAAATATTCCACCGGAAGAACTGAACTCAAAGGAGGAAACTTAAGGTCAGCATTTAGGCCTAGAGATTATCACAAGTCAGAAGGAATATACTTAGTCGACCCCCTCGCCGACAAAGCAAACTTGAAGAAGTCTAAGCCAGTGAAATTGTTATCCGTCGATAGTCTAAGAAAGGCATTGAGCAATGCAGGAAAAGTAACAACAACTTCACACTCGCAAGGGATTAGATTTCTTTCGGAGGTTGCAGGTAAATTTGATCAAAACATGATGAAAAAAGGACCAAAGATTCCAAACGAACACATCAAACACACAGAGAAGAGGAAGTCATCTTCTGTGACTACGGGACACTCTACTGTCATAAGAAACCAACAGTCAGATATAAAAAGGGTAAAAACAGAGGGGCAAAGTTCTGTTGATAAAACCACAAAGAATGCAATAAATATGATTGACTTAGATCTTGTTAGTTCGGATGATGACTTCTGA 1101 0.4233 MSSNEDDLDLLLSLQDKVPETPPASPSPLDFDGDDDVVPQRERPDMSVFKDAVQDCLLDQPPNPNPNPKPKPYNKSLGDDPQLDKFSGLRIRDQCLTPAELRESVQDIRFVRLPVIKNLVNGDISLEIGNCQEGRNVFAFFNCGVRKDAKGNGFSLSIYSPNQIVKMGTSVDYGVCKAKERDGMACTMAINKRQGAYCKYHKSKTSEKYSTGRTELKGGNLRSAFRPRDYHKSEGIYLVDPLADKANLKKSKPVKLLSVDSLRKALSNAGKVTTTSHSQGIRFLSEVAGKFDQNMMKKGPKIPNEHIKHTEKRKSSSVTTGHSTVIRNQQSDIKRVKTEGQSSVDKTTKNAINMIDLDLVSSDDDF* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0066 366 Pfam Primase zinc finger 168 213 IPR015408 GO:0005634|GO:0006260
Psa5g0066 366 PANTHER PROTEIN MCM10 HOMOLOG 137 297 IPR040184 GO:0003690|GO:0003697|GO:0006270
Psa5g0066 366 PANTHER PROTEIN MCM10 HOMOLOG 34 125 IPR040184 GO:0003690|GO:0003697|GO:0006270
Psa5g0066 366 Gene3D - 127 202 IPR012340 -
Psa5g0066 366 MobiDBLite consensus disorder prediction 57 77 - -
Psa5g0066 366 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0066 Psa-Chr5 3238054 3241794 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0066 17 365 Core DNA Replication Machinery Family AT2G20980 43.216 2.28e-85 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0066 K10736 - gmx:100527758 411.379