Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0064 ATGATCATGATAGGTGACGTTACCGAAGATCCTCGAGTTAGTCTTCTCAGCGCGATGGTCCAGTCTGCATTCGAAGATAACTTGGAGAATAAGAAATCAAGAATTCAACAAGATAACATGAAAGTGTCATCAAGATCATCATCGTCATCGTCGTCATCGCAGAAGCTTGGATGGCCGCTTCTCCGTCATCGGCCGCATACAGAAACCTCAAGAGACATGTCTGTCGTGCAATGGGTAATGAACTTACCAGACAGGTCTTCCTCTCAAATTGAGGACAAGAGCTCTAACAATGTTAACACTTTCAATAACTGCAAACGGTTCAAATTCGAGATTCTCAACTCTTGCACTCGTCGATTCTCTGAAGAAAACGTGATTGGAATCGGAGGTAGCAATCGCGTGTATAGAGGAACTCTCCCTAATGGAAATAAAGTGGCTGTCAAAGTTATGCAGTCACCAAAACAAGCCTTCAAAGATTTCGTTCTTGAAGTCGAAATAATGTCCGCATTGAACCACATAGCCGTTGCTCGTTTACTAGGAATTTGCATTGAAAATGGATCTTTGATATCTGTTTATGATTATTTCCCTCAAGGAACCTTACACCAAAATCTCCGCGGTAAGAGCAAGGATGGATCTATATTGCCATGGGAGGTGAGATTGAAGGTAGCTGTTGGGATCGCGGAAGCATTGAACTATCTGCATAACCAAATCTCGAAGCCTGTTATACATAGAGATGTCAAATCTTCCAACATTCTTCTTTCCCGCGGATTCGAGCCAAAATTATGCGATTTCGGACTTGCTATGTGGGGACCAACGACTTCATCGTTTACGATACAAAACGACGTAGTAGGAACGTTTGGTTATCTCGCACCTGAGTATTTCATGTATGGAAAGGTGAGTGACAAGATAGATGTATATGCCTTTGGTGTTGTCCTACTTGAACTCATATCAGGGAGAGAACCGATTTACTCGAAAACTTGCAAAGGACGCCAGAGTTTGGTCTCGTGGGCGAAACCGATTTTAGAGAGTGGAGATGTTAAAAGGTTAATGGATAGAAAGTTACAAGGAAAGTTTGATGTAGAACAAATGAATAGAATGGTTCTTGCAGCATCTCTATGCATAACACGGGCCGCGCGGCTTCGTCCTACCATGAGTAAGATAGTAAATATCTTGAAAGGATGCGACGAGAAAGACGTGAATTTGTTTAAATCTCAGGAGATTGATCGCGATCATTCGGAAAATCATGAAAACGTTGACGACGAAGTGTATCCGAATTCAAATGCTGACTTGCACCTAAACCTTGCATTTCTAGTATAG 1314 0.4216 MIMIGDVTEDPRVSLLSAMVQSAFEDNLENKKSRIQQDNMKVSSRSSSSSSSSQKLGWPLLRHRPHTETSRDMSVVQWVMNLPDRSSSQIEDKSSNNVNTFNNCKRFKFEILNSCTRRFSEENVIGIGGSNRVYRGTLPNGNKVAVKVMQSPKQAFKDFVLEVEIMSALNHIAVARLLGICIENGSLISVYDYFPQGTLHQNLRGKSKDGSILPWEVRLKVAVGIAEALNYLHNQISKPVIHRDVKSSNILLSRGFEPKLCDFGLAMWGPTTSSFTIQNDVVGTFGYLAPEYFMYGKVSDKIDVYAFGVVLLELISGREPIYSKTCKGRQSLVSWAKPILESGDVKRLMDRKLQGKFDVEQMNRMVLAASLCITRAARLRPTMSKIVNILKGCDEKDVNLFKSQEIDRDHSENHENVDDEVYPNSNADLHLNLAFLV* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0064 437 Pfam Protein kinase domain 120 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g0064 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Psa5g0064 437 Gene3D Transferase(Phosphotransferase) domain 1 194 419 - -
Psa5g0064 437 ProSiteProfiles Protein kinase domain profile. 119 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g0064 437 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK7 ISOFORM X1 101 436 - -
Psa5g0064 437 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK7 ISOFORM X1 23 96 - -
Psa5g0064 437 SUPERFAMILY Protein kinase-like (PK-like) 98 390 IPR011009 -
Psa5g0064 437 PANTHER OS08G0249100 PROTEIN 23 96 - -
Psa5g0064 437 PANTHER OS08G0249100 PROTEIN 101 436 - -
Psa5g0064 437 MobiDBLite consensus disorder prediction 39 57 - -
Psa5g0064 437 SMART serkin_6 119 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g0064 437 Gene3D Phosphorylase Kinase; domain 1 82 193 - -
Psa5g0064 437 MobiDBLite consensus disorder prediction 30 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0064 Psa-Chr5 3113924 3116458 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0064 100 390 Receptor kinase-like Gene Family AT3G58690 42.905 1.10e-74 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Psa5g0064 Pkinase 1.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0064 - - mtr:MTR_3g117850 607.446