Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0053 ATGTCTAAGCATGATTCAAAAGAAGGTTCATCATTAGATTCAAATTCAACCATTGATCCTTTAGAGAGCCAACCAATTATCATACATCATGACGGTAGTGTTACAAGGCTCATGCAAATACCAAACACTGAACCCACACAAGATCCGGATAACATTATTCTATCCAAAGATGTACCTATTAACCCTATTAACAAAACTTCGATACGTTTGTTTCTACCTCAAAAAACACTTCACAATTCTAAGAAATTGCCTATAATCGTTTACTATCATGGAGGGGGTTTTGTATTTTTCAGGGCTTCTTCAACGGTCAACCATGACTTTTGCTTCAAATTAGCTGAAAAAGTTAACATTGTAGTAGCCTCCGTGGATTATCGTCTGGCCCCGGAATCACGTCTCCCCGCTGCCTATGATGATGCAGTTGAGGCATTACATTGGTTGAGAAATGAGGAATGGGTTTGCCAATTTTGTGATGTGTCTAATTGTTATCTTATGGGATCTAGTGCGGGAGGGAACATTGCGTACCATACAGGTTTACAATGTGCTGCAATCGTTGATGAGTGTAACTTTGACCAATTGAAGATCAAAGGGTTGATATTGCACCAACCTTTTTTTGGTGGATCCCAAAGGACAAATTCGGAGTTGAAATTTAAAAATGATCGAGTTTTGCCTTTGAAGGCGAATGATCTAATGTGGGAATTTGCATTGCCCAAGGGGGCATACAGGGACCATAAGTTTAGTAATCCGATGATTATGGATGAAGGAGATGATAAATGTTTTAATGAAATCAAACGATTAAGATGGAAGATCCTTTTCATGGGTTGTTATGGAGACCCTTTGATTGATCGTCAACTTGAGTTTGTGGAGATGTTGAGAAGTAAAGGGGTTAATGTTGTAGAATACTTAAGAGAAGGTTTTCATGGGATGGAAATGTTGGAACCAAACACAGATGAACCACTTTTTGAACAAATAAAAGGTTTAATAAATCTATGTTAA 993 0.3787 MSKHDSKEGSSLDSNSTIDPLESQPIIIHHDGSVTRLMQIPNTEPTQDPDNIILSKDVPINPINKTSIRLFLPQKTLHNSKKLPIIVYYHGGGFVFFRASSTVNHDFCFKLAEKVNIVVASVDYRLAPESRLPAAYDDAVEALHWLRNEEWVCQFCDVSNCYLMGSSAGGNIAYHTGLQCAAIVDECNFDQLKIKGLILHQPFFGGSQRTNSELKFKNDRVLPLKANDLMWEFALPKGAYRDHKFSNPMIMDEGDDKCFNEIKRLRWKILFMGCYGDPLIDRQLEFVEMLRSKGVNVVEYLREGFHGMEMLEPNTDEPLFEQIKGLINLC* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0053 330 Gene3D alpha/beta hydrolase 22 328 IPR029058 -
Psa5g0053 330 Pfam alpha/beta hydrolase fold 86 308 IPR013094 GO:0016787
Psa5g0053 330 PANTHER ARYLACETAMIDE DEACETYLASE 14 321 - -
Psa5g0053 330 SUPERFAMILY alpha/beta-Hydrolases 24 313 IPR029058 -
Psa5g0053 330 PANTHER CARBOXYLESTERASE 1 14 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0053 Psa-Chr5 2636257 2637249 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0053 26 312 Carbohydrate Esterase AT5G16080 37.000 7.15e-55 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0053 - - aip:107641495 388.652