Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0004 GGGCGACCTTTAAGTCAATTGGTGGCTACAAGAGGCAACAATGGAATTTGTATCAAGAGCTTGTATTTTGAAGAAAAGTCTAGCAACAACTGCCCTGCCAAGATATTCTGTTGTAAGCATCAGAAATCAAGTTCACTTCTTTCTTCTACTACTTCGTTGAGATCATTCTATTGTCAAGAAACAAAAACAAGGATGGGTTTTCGCTTGCCTGGTATTAGACGATCATCATTCAGTGCAAGCCAATCATCTAGCAAAGAAGTGGAAGTCCCAAAAGGCTATCTTGCAGTCTATGTTGGAGAGAATGCGAGAAGGTTCTTGATTCCAATATCATTCTTAAACGAGCCTTTATTTCAAGAATTGCTAAGCCAAGCTGAAGAAGAATTTGGTTACTGTCATCCAATGGGCGGTCTTACCATTCCCTGCAAGGAAGATGTCTTCTTACATACAGCATCTCGCTTAAACGGCCTATAA 471 0.4034 GRPLSQLVATRGNNGICIKSLYFEEKSSNNCPAKIFCCKHQKSSSLLSSTTSLRSFYCQETKTRMGFRLPGIRRSSFSASQSSSKEVEVPKGYLAVYVGENARRFLIPISFLNEPLFQELLSQAEEEFGYCHPMGGLTIPCKEDVFLHTASRLNGL* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0004 156 Pfam Auxin responsive protein 73 151 IPR003676 GO:0009733
Psa5g0004 156 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 65 154 IPR003676 GO:0009733
Psa5g0004 156 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 65 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0004 Psa-Chr5 148016 149484 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0004 81 146 Calmodulin-binding Proteins AT3G43120 56.061 1.25e-18 75.9