Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0001 ATGGGTTTTCGTTTACCTGGTATTAGACGATCATCATTCAGTGCAAGCCAATCATCTAGCAAAGAAGTGGATGTCCCAAAAGGCTATCTTGCAGTTTATGCTGGAGAGAAAGCGGGGAGGTTCTTGATTCCAATATCATTCTTAAACGAGCCTCTATTTCAAGAATTGCTAAGTCAAGCTGAAGAAGAATTTGGTTACTGTCATCCAATGGGCGGTCTTATGATTCCCTTCAAGGAAGATGTCTTCTTACATACAGCATCTCGCTTAAACGGCCTATAA 279 0.4122 MGFRLPGIRRSSFSASQSSSKEVDVPKGYLAVYAGEKAGRFLIPISFLNEPLFQELLSQAEEEFGYCHPMGGLMIPFKEDVFLHTASRLNGL* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0001 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 90 - -
Psa5g0001 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Psa5g0001 92 Pfam Auxin responsive protein 10 87 IPR003676 GO:0009733
Psa5g0001 92 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0001 Psa-Chr5 126420 126698 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0001 14 82 Calmodulin-binding Proteins AT3G43120 49.275 9.21e-16 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0001 K14488 - gmx:100500615 145.206