Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5266 ATGGCTTTGGACGCACCTCCTGAAGAAGACCACCCGAAACGCCGTGCGTCTGATCATCCAGACTCACCGGTGTCATCCAAGAAGCGAGAAGTGGTCGGCGAAATCGCCAATCTCGACATCCAGAGTCCAGCCACAAAAGAAGAGACGACCGAGGAAAGCAAACAGCCATCTCCCTGTTCCATTTACAAATATCTCCATACCATGGAGAGGGATGAGAATAAGAGGCCATTAGGGAATTACATTGGGACAGTTCAGAAAAGGATGACAAATGACATGCGTGAAATTCTGATTGATTGGTTAGTGGAGGTTACTGAGGAATTCAAGCTTATTTCCGATACTCTTTATATCGGTGTTTCTTGCATCGATCGTTTCCTCTCTGTTCATCCTCTCGACAAAAACTACCTCCAGCTTCTCGGCATTACTGCCATCCTCATTGCCTCGAAGCAAGCAGATATTTGTTGTCCACCGGAGGAACGGTTGTGCTTTATGACGGATAATACTTACAACGTCTCCGAGGTTATACAGATGGAGAAGGATGTCCTTGCATGTTTGAACTCTGATTTATGCTATCCCACCTCTAGAAATTTTCTCAGAATTTTAATCGGAATTTTTCACAGTCACACCAATACTCTGCGCTGTACCAAGCCATTCGATTACTTGGTCTCTAAGAAATATGACCAGCAGATGGAATTCTTGGCTTGTTATCTTCTGGAGTTATGCTTATTATCATCCAAATGCATCAAGTTTTTACCTTCCATAGCTGCTGCTTCTGCGATATTTCTATCGAGGTTTATACTTGAACCAAAGGATCACCCCTGGAATCAAGAGTTAGAATGCCGATCAGGATATAAGGCAAGTGACCTGCAGGAATGTGTCCTTGCAATACATGAAGTGCACTCCAATATCTCAAAGTGGCCTGTACAAGCAGTCCGGGAAAAGTACATGAAATCCAAGTTTATGAGTATGGCATCTTTGACTGCTGGGGAGATTCCTGCAAATTATTTCGAGCCCATTGATCAATAA 1023 0.437 MALDAPPEEDHPKRRASDHPDSPVSSKKREVVGEIANLDIQSPATKEETTEESKQPSPCSIYKYLHTMERDENKRPLGNYIGTVQKRMTNDMREILIDWLVEVTEEFKLISDTLYIGVSCIDRFLSVHPLDKNYLQLLGITAILIASKQADICCPPEERLCFMTDNTYNVSEVIQMEKDVLACLNSDLCYPTSRNFLRILIGIFHSHTNTLRCTKPFDYLVSKKYDQQMEFLACYLLELCLLSSKCIKFLPSIAAASAIFLSRFILEPKDHPWNQELECRSGYKASDLQECVLAIHEVHSNISKWPVQAVREKYMKSKFMSMASLTAGEIPANYFEPIDQ* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5266 340 CDD CYCLIN 224 296 IPR013763 -
Psa4g5266 340 SUPERFAMILY Cyclin-like 64 188 IPR036915 -
Psa4g5266 340 PANTHER CYCLINS 13 337 IPR039361 -
Psa4g5266 340 ProSitePatterns Cyclins signature. 93 124 IPR006671 -
Psa4g5266 340 Gene3D - 74 189 - -
Psa4g5266 340 PANTHER CYCLIN-A3-1-LIKE 13 337 - -
Psa4g5266 340 CDD CYCLIN 92 181 IPR013763 -
Psa4g5266 340 Pfam Cyclin, N-terminal domain 61 189 IPR006671 -
Psa4g5266 340 Gene3D - 61 324 - -
Psa4g5266 340 SMART Cyclin_C_2 191 328 IPR004367 -
Psa4g5266 340 MobiDBLite consensus disorder prediction 1 58 - -
Psa4g5266 340 SMART cyclin_7 214 297 IPR013763 -
Psa4g5266 340 SMART cyclin_7 98 182 IPR013763 -
Psa4g5266 340 Pfam Cyclin, C-terminal domain 191 325 IPR004367 -
Psa4g5266 340 MobiDBLite consensus disorder prediction 1 34 - -
Psa4g5266 340 SUPERFAMILY Cyclin-like 221 326 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5266 Psa-Chr4 446063741 446066088 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5266 13 339 Core Cell Cycle Gene Families AT5G43080 40.395 6.40e-81 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5266 K06627 - tcc:18608037 280.796