Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5245 GCTGAGAATCCTAACAAACCTTGTCCCAATGGAACTAAGGTGGATATTAGCACCATGCTTGAGGAAGCTGTCCAATATGTGAAGTTTTTACAGCTTCAAATTAAGCTTCTAAGCTCTGATGATTTGTGGATGTACTCTCCGATTGCTTACAATGGAATGAACATTGGACTGGAACTTGTATTACCCAGCAAAAGAAACAAAGGATATGCAATAGCAATAAAAGAGAATGCAATGCAGCAGATTAAGAGGACTGATTTTATTTTGTGA 267 0.3783 AENPNKPCPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYSPIAYNGMNIGLELVLPSKRNKGYAIAIKENAMQQIKRTDFIL* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5245 88 PANTHER TRANSCRIPTION FACTOR BHLH139-LIKE 9 59 - -
Psa4g5245 88 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 9 59 - -
Psa4g5245 88 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 9 44 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5245 Psa-Chr4 445650258 445650732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5245 9 61 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 92.453 4.89e-29 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5245 - - mtr:MTR_5g005110 108.612