Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5233 ATGCGGCCAAACGCCGCCGGTAACGGCAACGACGACCGATGGGGAACAGCCGGACCGGCGATTCGCAAGAAAGGAACGAGTGTTCGTCCATGGCTGGTTGTCGACGTTACCGGAGACGCACAGGTGGTTGAGGCCGGAAAACACGCCATCATGAGACGAACTGGCCTCCCGGCACGTGACCTTCGAATCCTCGATCCTCTCCTTTCCTATCCTTCCACCGTTCTCGGACGAGAGAGAGCAATCGTCATCAATTTGGAACACATCAAAGCTATTATCACCGCAAACGAAGTTCTTCTTCTCAATTCAAGAGATCCTTCCGTTACTCCTTTTGTTCAGGAGCTTCAAGCGAGGATCCTCCGTCATCACGAAGCAACCACTAATCCTCAAGAAGATTCTCACGGCAGCGGAATTAAGATTCTTCCGTTCGAATTCGTTGCGCTTGAGGCGTGTCTTGAAGCGGCTTGTAGCGTTTTGGAGAATGAAGCCAAGACTTTGGAGCAAGAGGCGCATCCTGCTCTTGATAAATTGACGTCGAAGATTAGTACTCTGAATTTGGAACGCGTGAGACAAATTAAGAGCCGTTTGGTTGCGATAACGGGGAGGGTTCAAAAGGTGAGAGATGAATTGGAACATTTGCTTGATGATGATGAGGATATGGCTGAAATGTATCTTACTGAAAAGATACTTCAACAGCAGTTGGAACAAACGTCTTCTGAGGAAGATATTGATGCTCATGATGATGATGATAATGATATTGATAGAGCAGAAGGTGTTGAAATATCTTTGGAAGGGCGGGTAGGAGGAGAGGCAGGTTATGAGGACGGGGATGAGGATGAGGATAATCAAAATCGAAATGCGGGAGAACATATGTTTGGTGCTACAAATCAAATTGGTAGGGATAGCCGCGGCGGAACAAGGGCGAGCACTACTTATAGTGCCACCACCAATAAGCTTGATGTTGAGGAGCTTGAGATGCTCTTGGAAGCATACTTTGTTCAAATTGATGGAACTCTCAACAAGCTTTCCACGTTGAGGGAGTACGTCGATGACACAGAGGATTACATCAATATTATGCTGGATGACAAACAGAACCATCTCCTCCAAATGGGAGTCATGTTGACCACGGCAACTCTGGTAGTGAGTGCCTTTGTTGTTGTGGCTGGTGTTTTTGGCATGAATATTCATATTGAACTGTTTGATGATAAGCTCTACGGGACGAGAGAGTTTATGTGGACTGTTGGTGGCGGCACTGCTGGGACCATATTCTTGTATGTGGTTGCCATTGCCTGGTGCAAGTATAAACGCTTGCTAGAATAA 1317 0.47 MRPNAAGNGNDDRWGTAGPAIRKKGTSVRPWLVVDVTGDAQVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTVLGRERAIVINLEHIKAIITANEVLLLNSRDPSVTPFVQELQARILRHHEATTNPQEDSHGSGIKILPFEFVALEACLEAACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKILQQQLEQTSSEEDIDAHDDDDNDIDRAEGVEISLEGRVGGEAGYEDGDEDEDNQNRNAGEHMFGATNQIGRDSRGGTRASTTYSATTNKLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGVFGMNIHIELFDDKLYGTREFMWTVGGGTAGTIFLYVVAIAWCKYKRLLE* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5233 438 Coils Coil 148 168 - -
Psa4g5233 438 MobiDBLite consensus disorder prediction 1 20 - -
Psa4g5233 438 Gene3D Magnesium transport protein CorA, transmembrane region 105 366 - -
Psa4g5233 438 PANTHER MAGNESIUM TRANSPORTER MRS2-D-RELATED 18 127 - -
Psa4g5233 438 PANTHER MAGNESIUM TRANSPORTER MRS2-D-RELATED 131 438 - -
Psa4g5233 438 MobiDBLite consensus disorder prediction 232 251 - -
Psa4g5233 438 Gene3D - 19 102 - -
Psa4g5233 438 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 131 438 IPR039204 -
Psa4g5233 438 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 18 127 IPR039204 -
Psa4g5233 438 CDD Mrs2_Mfm1p-like 31 436 IPR039204 -
Psa4g5233 438 MobiDBLite consensus disorder prediction 258 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5233 Psa-Chr4 445428145 445430983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5233 31 438 MRS2 Gene Family AT3G19640 65.022 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5233 - - mnt:21394404 553.518