Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5227 ATGGCAAGTTTGAACATGGAATACTATCTTCCAATAATAGTTATGGTGGTCATACAATTTATATTTTCAGGTATGACTCTTTGGAACAGAGTTGCCCTTGTGGAGGGTTTGAGTCCAAGAGTATTTGTAGTCTATCGTCATGCTCTTGCAACCATTTTTCTTGCTCCCATTGCTTATATATCTTCAAGGAGAAACTCTACCTCGTGTAGCTTAAATTTAAGGAGTTTTTGCTTGATATTCATCACCTCACTAATTGGTATTACATTGAATCAAAATTTATTTTCTGAGGGTCTATATCTATCTTCTTCTTCAACTACAAGTGCCATGACCAATCTTATTCCAGCTGTCACATTTGTAATAGCAGCCATTGCAGGAATGGAGAGAGTGAATATTCGAAGTTTGAGAACTATAGCTAAAATAGTAGGGACAATTATATGTGTAAGTGGAGCGGTGTCCATTACATTATTGAAGGGTCCAAAGCTACTAAATGCAGAAAACTTACCTTCAGAATCAATCATTGGTTCATCCTTAAAAAGTGAAGAAAAATGGTTGCTTGGATGTCTGTGTCTTCTAGGAAGCATTATTGCTTGGTCAATTTTTCTCATTTTGCAGGTTCCAGCTTATGCAAGCCATCCTAATTCTTTATCACTAGCAGCATGGATGTGTTTAATGGCAACATTACAATCATTAGCAGTAACATTGTTTTTGGAGCCGGATCTTAATGCTTGGAAGATTATTTCTCTATTTCAATTTGGTTGCATTTTATATTCAGGAGTTATAGGATCTGGAGTTGCACTTTATCTTCAAGCATGGTGCATTTCAAAGAGAGGGCCTCTTTTCTCTGCAATGTTTAATCCTCTCTTAACATTGATTGTCACTATACTAGCTACCTTATGGCTTCATGAAGAAATATACATTGGAAGTTTGATAGGTGCAATTGGAGTCATCATTGGCTTGTATATTGTACTTTGGGGTAAAGCTGAAGATGTAGTTGATCACCCAGAGAAAAATGTTGACAGTGAGTCTTGTGGAAAACCCTATTGTAAAAGTGGTTTGAAAGATCCTCTATTACCCAACTAA 1080 0.3639 MASLNMEYYLPIIVMVVIQFIFSGMTLWNRVALVEGLSPRVFVVYRHALATIFLAPIAYISSRRNSTSCSLNLRSFCLIFITSLIGITLNQNLFSEGLYLSSSSTTSAMTNLIPAVTFVIAAIAGMERVNIRSLRTIAKIVGTIICVSGAVSITLLKGPKLLNAENLPSESIIGSSLKSEEKWLLGCLCLLGSIIAWSIFLILQVPAYASHPNSLSLAAWMCLMATLQSLAVTLFLEPDLNAWKIISLFQFGCILYSGVIGSGVALYLQAWCISKRGPLFSAMFNPLLTLIVTILATLWLHEEIYIGSLIGAIGVIIGLYIVLWGKAEDVVDHPEKNVDSESCGKPYCKSGLKDPLLPN* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5227 359 PANTHER WAT1-RELATED PROTEIN 11 340 - -
Psa4g5227 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 152 - -
Psa4g5227 359 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020|GO:0016021
Psa4g5227 359 Pfam EamA-like transporter family 11 150 IPR000620 GO:0016020|GO:0016021
Psa4g5227 359 PANTHER WAT1-RELATED PROTEIN 11 340 IPR030184 GO:0016021|GO:0022857
Psa4g5227 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 221 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5227 Psa-Chr4 445289021 445290721 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5227 5 357 Nodulin-like Gene Family AT4G30420 53.552 9.03e-134 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5227 - - gmx:100812331 432.18