Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5210 ATGGCAAGTTTAAGCATGGAGTACTATCTTCCAGTATTGGTTATGGTTTTGATACAATTTATATATTCAGGTTTGACTCTTAGTACAAGAATTGCCCTTGTGGAGGGTATGAGCCCAAGGGTATTTGTGGTATATCGTCATGCTTTTGCAACCCTAATTTTTGGCCCCATTGCTTATATATCATCAAGGAGAAACTCGACTTCTTGCTCCTTAAATTTGAAGAGTTTTTCATTGATATTCATCACCTCACTAATTGGCGTTACATTGTATCAAAATTTATATTTTGAGGGACTATATCTATCTTCTTCTTCAGTTGCAAGTGCCATGCTAAACCTTATTCCAGGAGTCACATTTGTAATAGCAGCCTTTGTAGGAATGGAGAAAGTGAATTTTAGAAGTTTGAGAACTATAGCCAAAATTGTGGGGACATTGATATGTATTTGTGGAGCAATGTTCATCGCATTGTTGAAGGGTCCAAAACTACTGAATGCAGAAAACACACCTTTGAAATCAGTCATGGCCTCAACCTTGGGAGGTGATGAGAACAAATGGTTGTTAGGTTGTTTATTTCTTTTGGGAAGTAATGTTTCTTGGGCAGTTTTTCTCACTTTACAGGTTCCAGCATATGCAAACCATCCTAATTATTTATCACTATCAGCATGGATGTGCTTAATTTCAACATTCCAATCAGGAGTAGTCACAATATTCTTGGAGCCAGACCTAAATGCATGGAAAATTACTTCTCTACTTCAACTTGGTTGCACTTTATATGCAGGAATTATGGGATCTGCAGTTGCATTTTGTCTCCAAGCATGGTGTATTAAAAAAAGAGGACCTCTTTTTTCTGCAATGTTTAGTCCTCTTGTGACATTAATTGTGACTGTATTAGCTGCCTTGTTTCTTCATGAAGAATTATACACCGGAAGCTTAATAGGCGCAATTGGAGTGATCGTTGGCTTGTACATTGTGCTTTGGGGTAAAGCTGGAGATGTATTTGAAGTCAAAGAGAAGATGGATCCCAAATTGATGGTTAATGAGAGACAGGAAGTGACATTTTCTATGAATGAATCTTATGGAGAATCAGGTAGTAGAATTGATATAGAAGAACCTCTTTTAACCGATGTTGTAAAAATAGATCATAGATCGTAG 1149 0.3699 MASLSMEYYLPVLVMVLIQFIYSGLTLSTRIALVEGMSPRVFVVYRHAFATLIFGPIAYISSRRNSTSCSLNLKSFSLIFITSLIGVTLYQNLYFEGLYLSSSSVASAMLNLIPGVTFVIAAFVGMEKVNFRSLRTIAKIVGTLICICGAMFIALLKGPKLLNAENTPLKSVMASTLGGDENKWLLGCLFLLGSNVSWAVFLTLQVPAYANHPNYLSLSAWMCLISTFQSGVVTIFLEPDLNAWKITSLLQLGCTLYAGIMGSAVAFCLQAWCIKKRGPLFSAMFSPLVTLIVTVLAALFLHEELYTGSLIGAIGVIVGLYIVLWGKAGDVFEVKEKMDPKLMVNERQEVTFSMNESYGESGSRIDIEEPLLTDVVKIDHRS* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5210 382 Pfam EamA-like transporter family 11 154 IPR000620 GO:0016020|GO:0016021
Psa4g5210 382 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020|GO:0016021
Psa4g5210 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 327 - -
Psa4g5210 382 PANTHER WAT1-RELATED PROTEIN 11 354 IPR030184 GO:0016021|GO:0022857
Psa4g5210 382 PANTHER WAT1-RELATED PROTEIN 11 354 - -
Psa4g5210 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5210 Psa-Chr4 444884960 444887586 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5210 6 374 Nodulin-like Gene Family AT4G30420 52.151 1.78e-133 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5210 - - gmx:100812331 443.736