Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5209 ATGGCAAGTTCAAACATGGAATACTATCTTCCAATAATGGTTATGTTGTTATTACAGTTTATATTTGCAGGTATGACTCTTGGCACAAGAATTGCTCTTTTGGAGGGTTTGAGCCCAAGAGTGTTTGTAGTCTACAGATGTGCTTTTGCAACCATTGTTCTTGCTCCTCTTGCTTATTTATCATCAAGGAGAAATTCTGCTTCCTGTTCATTAAATTTAAGGAGTTTTTCATTGATATTCATCACCTCTCTAATTGGCATTACAGTGAATCAAAATTTGTATTTAGAGGGTTTATATCTTACTTCTTCTTCGGTTGGAAGTGCCATTTGCAATCTTCTTCCTGCAATAACATTTATAATAGCAGCAATTGTAGGAATGGAGAAAGTAAATATTAGAAGTTTGAGAACTATAGCCAAAATAGTTGGGACAATTATCTGTGTAGGTGGAGCAGTGGCCATTGCATTGTTGAAGGGTCCAAAGCTACTAAATGCAGAAAATCTACCTTCAAAATCAATCTTAACATTAGGCTCATCAGGAAGTGATGAGAATTGGTTGCTTGGATGTATGTGTCTCCTTGGATGCATCATTGCCTGGTCTGTTTTTATCATTTTGCAGGTTCCAACTTATGCAAGTCATCCTAATTACATATCACTTTCAGCATGGATGTGTTTCATGGCAACATTACAATCAGCAGCAGTGACATTATTCATTGAGCAAGACCTAAATGCATGGAAGATTACTTCTATACTTGAACTTGGTTGCTGTTTATATGCAGGAACTATGGGATCTGCAGTAACATTCAGTCTCCAATCATGGTGCATTTCAAGAAGAGGACCTGTTTTCTTTTCTATGTTTAATCCTATTTTCACATTAATTTGCACTGTATTGGCAGCTTTGTTGCTTCATGAGGAAATATACATTGGAAGCTTGATAGGTGCAATTGGAGTGATTATTGGCTTGTTTATTGTGCTTTGGGGTAAAGCTGAAGATGTAGTTGAAGTGAGAGAGAAGATAGACCCAAAATCTATGGTTAATGAGAAAGAGGAAGTGAAGTTATTGATAGATGAATCCTCTAAAAAGGAATACTCTAAAACAGATTTGAAAGAACCTCTCTTACCATGTTAG 1125 0.3627 MASSNMEYYLPIMVMLLLQFIFAGMTLGTRIALLEGLSPRVFVVYRCAFATIVLAPLAYLSSRRNSASCSLNLRSFSLIFITSLIGITVNQNLYLEGLYLTSSSVGSAICNLLPAITFIIAAIVGMEKVNIRSLRTIAKIVGTIICVGGAVAIALLKGPKLLNAENLPSKSILTLGSSGSDENWLLGCMCLLGCIIAWSVFIILQVPTYASHPNYISLSAWMCFMATLQSAAVTLFIEQDLNAWKITSILELGCCLYAGTMGSAVTFSLQSWCISRRGPVFFSMFNPIFTLICTVLAALLLHEEIYIGSLIGAIGVIIGLFIVLWGKAEDVVEVREKIDPKSMVNEKEEVKLLIDESSKKEYSKTDLKEPLLPC* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5209 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 224 327 - -
Psa4g5209 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 156 - -
Psa4g5209 374 PANTHER WAT1-RELATED PROTEIN 12 356 - -
Psa4g5209 374 Pfam EamA-like transporter family 11 151 IPR000620 GO:0016020|GO:0016021
Psa4g5209 374 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020|GO:0016021
Psa4g5209 374 PANTHER WAT1-RELATED PROTEIN 12 356 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5209 Psa-Chr4 444865436 444869934 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5209 5 372 Nodulin-like Gene Family AT4G30420 53.639 2.05e-139 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5209 - - gmx:100812331 466.077