Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5195 ATGGTGGAAGGGACTATGTCTCTTGATGCTGTTATAAAGGAAGCTGTTGATTTGGAGAACATTCCTATTGAGGAGGTATTTGATAATCTAAAATGCACAAAAGATGGTTTAACCTCTGAGGAAGTACAAGAGAGGCTTGACATGTTTGGATACAATAAACTTGAAGAAAAAAAGTTTTTAGGGTTTATGTGGAATCCTTTGTCATGGGTTATGGAAGCTGCTGCTCTCATGGCCATTGCTATGGCACATGGAGGGGTACTTCGTGACGGAAAATGGAGCGAAGAAGATGCTTCGGTATTGGTCCCTGGAGACATAGTTAGCATCAAGCTAGGGGACATCATTCCTGCCGACGCACGTCTCCTTGAAGGTGACCCTTTGAAGATTGATCAGTCTGCTCTTACCGGAGAGTCACTCCCTGTGACTAAACATCCTGGAGTTCACACATTTTTCGGAAAGGCAGCTCATCTCGTCGAAAACACAACACACGTTGGACATTTCCAACAGGTTTTGACATCTATTGGAAATTTCTGCATCTGTTCAATTGCTATTGGAATGATTATTGAAATCATTGTGATATACGGCGTCCACGGATATGGTTACAGAAACGGTATTGATAACCTTCTAGTGCTACTAATTGGAGGAATCCCTATTGCAATGCCAACTGTTCTTTCAGTTACAATGGCTATTGGCTCACATAAGTTATCTCAGCAGGGTGCTATAACAAAGAGAATGACTGCTATTGAAGAAATGGCCGGAATGGATGTGTTATGCAGTGACAAAACAGGCACATTAACTCTTAACAAGCTTACAGTGGACAAGGAAATGATTGAGGTTTTTGCCAAAGGTGTTGGCAAGGATTTGGTTGTACTTATGGCTGCAAGAGCATCAAGGATGGAGAACCAAGATGCAATTGATTGCGCAATCGTTTCAATGTTGGCAGACCCAAAGGAGGCACGAGCTGGAATAAAAGAAGTTCATTTCCTTCCGTTTAATCCAACTGATAAAAGAACTGCCCTTACATACATTGATGGTGCTGGTAATATGCACAGGGTTAGCAAAGGTGCACCAGAGCAGATTCTCAATCTTGCACAAAACAAGGCAGAAATCGAACGGAAGGTTCATGCGATGATTGACAAGTTTGCAGAACGTGGACTTCGTTCTCTTGGGATTGCAAGACAGGTTTATTTCCCTCTTACGAATTCTTCATAA 1209 0.4218 MVEGTMSLDAVIKEAVDLENIPIEEVFDNLKCTKDGLTSEEVQERLDMFGYNKLEEKKFLGFMWNPLSWVMEAAALMAIAMAHGGVLRDGKWSEEDASVLVPGDIVSIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKHPGVHTFFGKAAHLVENTTHVGHFQQVLTSIGNFCICSIAIGMIIEIIVIYGVHGYGYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKEMIEVFAKGVGKDLVVLMAARASRMENQDAIDCAIVSMLADPKEARAGIKEVHFLPFNPTDKRTALTYIDGAGNMHRVSKGAPEQILNLAQNKAEIERKVHAMIDKFAERGLRSLGIARQVYFPLTNSS* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5195 402 PANTHER CALCIUM-TRANSPORTING ATPASE 86 145 - -
Psa4g5195 402 PANTHER CALCIUM-TRANSPORTING ATPASE 4 85 - -
Psa4g5195 402 PANTHER CALCIUM-TRANSPORTING ATPASE 145 393 - -
Psa4g5195 402 SMART Cation_ATPase_N_a_2 17 83 IPR004014 -
Psa4g5195 402 Gene3D - 62 261 - -
Psa4g5195 402 Gene3D - 269 400 IPR023299 GO:0000166
Psa4g5195 402 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 251 IPR023298 -
Psa4g5195 402 PRINTS P-type cation-transporting ATPase superfamily signature 129 143 - -
Psa4g5195 402 PRINTS P-type cation-transporting ATPase superfamily signature 257 271 - -
Psa4g5195 402 PANTHER PLASMA MEMBRANE ATPASE 145 393 - -
Psa4g5195 402 PANTHER PLASMA MEMBRANE ATPASE 86 145 - -
Psa4g5195 402 PANTHER PLASMA MEMBRANE ATPASE 4 85 - -
Psa4g5195 402 SUPERFAMILY Calcium ATPase, transduction domain A 86 155 IPR008250 -
Psa4g5195 402 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 263 395 IPR023299 GO:0000166
Psa4g5195 402 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 87 273 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa4g5195 402 Pfam E1-E2 ATPase 86 145 - -
Psa4g5195 402 Pfam E1-E2 ATPase 145 236 - -
Psa4g5195 402 Pfam Cation transporter/ATPase, N-terminus 20 77 IPR004014 -
Psa4g5195 402 ProSitePatterns E1-E2 ATPases phosphorylation site. 259 265 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5195 Psa-Chr4 444608606 444611396 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5195 7 393 Primary Pumps ATPases AT3G60330 68.547 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5195 K01535 - gmx:100794938 634.024