Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5191 ATGAGGGACCGAAAAGAAACCCCTGCAGTGCACCGGCGTAGAACAAATAAACACAGAATGAGAGTGATGCTGTTAACCCTTTCACGCCATTTATGTACCAGCAGCAAGAACATCACAGCAACCTTAAAATTCTCAAAAACAAAATTCCCTTGTCGGTACAAGAAAGCTACTATATCACAAGCTCAACTGTCACTCACTGATTACCTCCACGCCACAAGGTCCATCCCTTACGCCTTCGCTGATCAAATTTCCAAAAACTCCATTCATTCCCTCTCCAATCTCATTTCAAAGTTGGGCTCTTTTTCATCTTCTGATTTCCCCAAGAAACTTGATAAGTTCTTAAGGTACAACCCAATTAATGAATTTGAGTTTTTCTTTGAAAGCATTGGAATTCAGTATACTCAAATTTCTCATTTGTTGCCTCATGACAAGTTCTTCTTCTCTGAAGATGGGTCACTTCTTGATTCTGCTTGTGTACTTTGTGAATTTGGGTTTCCTTGGGATAAGCTTGGGGTGCTTTATGTGGAGAGTGGTTTTGTGTTTAAGATGAGTGGTACTGAGTTGAAGGGTAGGCTTTGTTGGTTTCAAAGATATGGTTTTTGTAATGTGCAGATTGTTGGGATATGTTTGACTTTTCCTTATGTTTTTGGTGTGGAGGAAGGGAAATTGGTTGATGAGATTGATGGGTTGCTTTCTGAGTTGAGATTGGTGTTTTTGGATTTTGATTTGGGAGGGTCCGTTGAAGGGAATGTGCATGTTTGGCATGAGGTTTGTAGGAAAATTAAAGTGTTTTATGATTTGAGTGATGCTAAGGGGAAGATAGGTGAACTCATTGGAAGGAATAAACATGTCATTCTTGAACATAAAGAAGAGGATTTGATTGAAAAAGTTGAGTATTTTTGTAGATTTTGTGTTGAGAAAGAGGAAGTAGGCCGGTTGATTCTACAAGGTTCGGAGTTGTTGAATCTTGATTTGGAAAAGCCGGTGATTAACATGTTGAAGTTGTTGAAACACGTCGGAATGAGCTCTAAAGGTCTTGGTGATGTAAGGAAGAACTATGCCCATGCGTTGGGAACAATAAAAATCGAGAATCTTCCCAATGCGATGAGGGCTATGGGTTTACAAGAATGGTTTTTCGATAGAATCAAGGATGGGAATCATATGCTTTTGGTGAAGTTTATCGAAAGCTATCCCAATGAAGAGCATGATAAAGGTTATCAAAGTGGTTTGAAGACAATTCATAATGCAAGAACACCAACTCACAATATGAGTAAATTAAATTTCATGCATAGTAATGGATTTGGTGAAAATGCGATGACCATGGATATCTTAACTCACATGCATGGAACAAGTGAAGAGTTACAAAAAAGATTTGATTGTCTTCTACATTTAGGGATTGAATTCTCAAAGCTGTGTAAGATAATCACAAAGCAGCCAAAGGTTCTAAGCCAAAATCCCGAAACTCTAGAGAAAAAGATTAATTTTTTACGTCAGGAGATGGGAAAGTCCTTAGAGCTTTTGGACACTTTTCCAGCATTTATATGTTTTGATTTAGAGAACCGAATTAAGCCGAGGTTCAGATTCCATATGTGGGTTTTGGAAAAAGGATTGTCTTCCAAAAACTATTCCATTGCAAGCATGATTGCGACTAGTGACAAGAATTTTGTTGGCCGCGCTTTTAAAATTCACCCCGCCGCTCCAAAACATTGGTTTGAGCAATTCTATCCCAAGAAATTTTGA 1740 0.3839 MRDRKETPAVHRRRTNKHRMRVMLLTLSRHLCTSSKNITATLKFSKTKFPCRYKKATISQAQLSLTDYLHATRSIPYAFADQISKNSIHSLSNLISKLGSFSSSDFPKKLDKFLRYNPINEFEFFFESIGIQYTQISHLLPHDKFFFSEDGSLLDSACVLCEFGFPWDKLGVLYVESGFVFKMSGTELKGRLCWFQRYGFCNVQIVGICLTFPYVFGVEEGKLVDEIDGLLSELRLVFLDFDLGGSVEGNVHVWHEVCRKIKVFYDLSDAKGKIGELIGRNKHVILEHKEEDLIEKVEYFCRFCVEKEEVGRLILQGSELLNLDLEKPVINMLKLLKHVGMSSKGLGDVRKNYAHALGTIKIENLPNAMRAMGLQEWFFDRIKDGNHMLLVKFIESYPNEEHDKGYQSGLKTIHNARTPTHNMSKLNFMHSNGFGENAMTMDILTHMHGTSEELQKRFDCLLHLGIEFSKLCKIITKQPKVLSQNPETLEKKINFLRQEMGKSLELLDTFPAFICFDLENRIKPRFRFHMWVLEKGLSSKNYSIASMIATSDKNFVGRAFKIHPAAPKHWFEQFYPKKF* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5191 579 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF18, MITOCHONDRIAL 39 574 - -
Psa4g5191 579 PANTHER CGI-12 PROTEIN-RELATED 39 574 IPR003690 GO:0003690|GO:0006355
Psa4g5191 579 Pfam mTERF 259 359 IPR003690 GO:0003690|GO:0006355
Psa4g5191 579 Pfam mTERF 451 555 IPR003690 GO:0003690|GO:0006355
Psa4g5191 579 SMART mt_12 206 237 IPR003690 GO:0003690|GO:0006355
Psa4g5191 579 SMART mt_12 311 342 IPR003690 GO:0003690|GO:0006355
Psa4g5191 579 SMART mt_12 504 538 IPR003690 GO:0003690|GO:0006355
Psa4g5191 579 SMART mt_12 275 306 IPR003690 GO:0003690|GO:0006355
Psa4g5191 579 SMART mt_12 472 503 IPR003690 GO:0003690|GO:0006355
Psa4g5191 579 Gene3D Transcription termination factor 3, mitochondrial 253 574 IPR038538 -
Psa4g5191 579 Gene3D Transcription termination factor 3, mitochondrial 85 240 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5191 Psa-Chr4 444479038 444482491 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Psa4g5191 mTERF 2.8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5191 - - gmx:100812245 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g5191 4 444479038 444482491 Psa4g5191 4 444479038 444482491 ECH