Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5187 ATGCTACTGCTCTTATCTTCACCACTATCCTCTCCCTTACTCATGCAATCTCTTCCATCGAAATTTCTTTGTGCTGTACAAGGACAAGGAGAATCAACTCATGGATGCACTAATAAAAACCAAAAGGATTACATAGTGCAGGATAGTTCCACATTACATCCTGAGAATGTATTAAGGAGGAAATTTCTGCTTTCTGCTTTGGTCCCAGCTGTTGTTTTCCCAATTTTATCATCTGATGCGAAGGCGAAAAATATTAATCCGTATAATGAAAAACGCGTGTTACAACAAAATAGGAATATACAAAAACAGAACAATGTACCAGATGACTTCCCAAATTTTATTAGAGAAGGTTTTGAAGTTAAAGTGATAGCACCGGATGACTATGTAAAACGTGATTCGGGGCTAATATATCGAGATTTTGAAGTTGGTACAGGTGATTGTCCAAAGGATGGTCAGCAGGTAACATTTCATTATGTTGGTTATAACGAATCCGGCCGCCGTATCGACAGCACGTATTTGCAAGGCTCTCCTGCCAAAATCCGCATGGGTAACAAGGCATTGGTTCCAGGATTTGAGGAAGGAATTAGAGACATGAAAGCGGGTGGAAAGAGAAGAATCATTATCCCCCCTGATCTCGGACCCCCGGTAGGGCCTTCGACATTTTTCAGCGCAAAACAATTTGAAGTTTTTGATGTTGAATTATTAAGCATACAAAACTGTGAAAGAAGAACCATAGGATTTTATTCTGATGTTGTATGCAATTGA 765 0.3948 MLLLLSSPLSSPLLMQSLPSKFLCAVQGQGESTHGCTNKNQKDYIVQDSSTLHPENVLRRKFLLSALVPAVVFPILSSDAKAKNINPYNEKRVLQQNRNIQKQNNVPDDFPNFIREGFEVKVIAPDDYVKRDSGLIYRDFEVGTGDCPKDGQQVTFHYVGYNESGRRIDSTYLQGSPAKIRMGNKALVPGFEEGIRDMKAGGKRRIIIPPDLGPPVGPSTFFSAKQFEVFDVELLSIQNCERRTIGFYSDVVCN* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5187 254 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 22 254 IPR044239 -
Psa4g5187 254 SUPERFAMILY FKBP-like 88 238 - -
Psa4g5187 254 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 148 234 IPR001179 GO:0003755
Psa4g5187 254 Gene3D - 114 244 IPR046357 GO:0003755
Psa4g5187 254 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 151 238 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5187 Psa-Chr4 444383846 444386945 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5187 146 240 Calmodulin-binding Proteins AT5G48570 30.392 1.93e-09 55.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g5187 4 444383846 444386945 Psa4g5187 4 444383846 444386945 ECH