Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5177 ATGGAGAGGTTTTCAGAGCAGAAGGTACTTCCACGAAACTTGCCTATTTTGGTTGAGGTTTCTCCGAATATGGGAACTGCGAGAGAGACAGTTCCGAGGATAAACAGGCATGAGATTTCGAATGCTAGGTGGATTTCAGCTAGAGAATTGAATCAATTGTCGCAGGCAAGGGACGTGCCTATGACACGTTTGGCTTCGATTAGAGAAGTGGCGCAGTTGTCGAATGCACGGATACTATTGGTTAGAGATGATATGGAATTTGATACTAGAGAGTCTCCGGAGTCTATCTCGTTTGAGCCTACTAGAACATGGAAAGGAAATTCATCTTTTCTAGAAGGAGAAGATCTGATGTATGATGTAGACACGTTGAAGGGAAGCAGTGATTCGTTTGAGGATGGTGATCCGAGTTTATTCGCTGGTGCTAGTCATCCCCCGGAACCTGTTGATACGGATCTTATGAGAACGGTTTATGTACCGATTGGTCAAAACAAATCTGAGGCCGGATGCTTACTTAAAAACTTGTCCATGAAGGGGCCTTTCCTAGAAGATCTATCGATCCGTGTTCCTGCAAAGAAACCAAGTCCAATTGTTCTTTCCCCTCAAGGAAGTCTAGGTGAAGAACTAAACGACACGGGGAACTTATCCTCCCCCTTTGCAGGTTCTCGAGCATCTCAGAATACTGAGAACTCTCTCCTTGCACCGGATTCTGAGGAAAAGGAATGTGTTTGGGATGCTTCTTTGCCTCCTACTCCTAGTGGTGATGTCAGTCCACATAGTAGTATCGATAGTATTGGTGTTGTCAAGGCAATGAGCATTGCTAATAGTTGCGCTAGTACATATCGGAGCGATGCAATCACTAGTGATGGCATGCTTAGTTTAGATAGGAACTTTGATAGCATTAAGGGTAGTGTAAGGGGTGATTCACTTGAGAGTGCAAAAACTAGTGCGAGTCGTGCAAGCGATAGCAGTGGCCTCAGTGATGACAGTAATTGGAGCAACCTTACCGGTAGTGCCAATAAGCCTCACAAAGGAAATGATCCCAGGTGGAATGCAATTCTTGCTGTTCGGTTACGGGATGGAATTTTGGGCATGAGTCATTTTCGATTACTCAAACGACTTGGATGTGGTGACATTGGGAGTGTATATCTCTCAGAGCTGAGTGGAACCCGGTGTTATTTTGCAATGAAAGTTATGGATAAGGCATCCTTAGCAAGTAGAAAGAAGCTAACTAGAGCACAGACGGAGAGAGAAATATTGCAGTTGTTAGACCATCCATTTCTTCCAACTTTGTATACACATTTTGAGACTGACCGTTTCTCCTGTTTGGTAATGGAATATTGTCCTGGGGGTGACCTGCACACACTAAGGCAGCGGCAACCTGGGAAACATTTCTCTGAATATGCTGCGCGCTTTTATGCTGCTGAGGTACTGCTTGCTCTTGAATATCTTCACATGCTTGGAGTTGTGTACAGAGACCTTAAACCTGAAAATGTGTTGGTCCGAGATGATGGTCACATAATGCTCTCAGATTTTGATCTTTCCCTCAGATGTACTGTTTTGCCAACTCTCATTAGAGCTTTTGACGGCGACCCTTCAAAACGGGCTGGTGGTGCATTCTGTGTCCAACCTGCTTGTATTGAGCCATCATCCGTATGCATACAACCGGCATGTTTTATTCCTCGTCTCTTTCCTCAGAAAAACAAGAAATCAAGAAAGCCAAGAGCTGAACCTGGGTTTCCTTCCAGCAGACTCCCCGAGCTTGTAGCTGAGCCTACTGCTGCTCGATCTATGTCCTTTGTCGGCACCCACGAATACCTTGCTCCTGAAATTATCAAAGGGGAAGGTCATGGAAGCGCAGTTGATTGGTGGACATTTGGAATATTCTTGCACGAATTATTATATGGCAAAACCCCTTTCAAAGGGTCAGGAAACCGTGCTACACTTTTCAATGTAGTAGGTCAGCAACTCAAATTTCCCGAGTCTCCCGCGACCAGTTACGCTAGCAGGGATCTGATCCGCGGCTTACTGGTGAAGGAGCCGCAGCATCGTCTCGGGGTTAAAAGAGGCGCAACTGAGATCAAGCAGCATCCTTTCTTTGAAGGCGTGAACTGGGCATTGATTAGGTGCAGCACACCACCAGAAGTACCAAGACCAGTGGAAAATGAACCGCCGCCGCCACCACCAATGAAGGTTGGACCAGCAATTGATGCTGTTGGGTTTGGCAGTACTAGTAAGAGGATGTCAGGTAACAATGAAATGAAGCCTGGGGGTAAATATCTGGATTTTGAGTTCTTTTAA 2298 0.456 MERFSEQKVLPRNLPILVEVSPNMGTARETVPRINRHEISNARWISARELNQLSQARDVPMTRLASIREVAQLSNARILLVRDDMEFDTRESPESISFEPTRTWKGNSSFLEGEDLMYDVDTLKGSSDSFEDGDPSLFAGASHPPEPVDTDLMRTVYVPIGQNKSEAGCLLKNLSMKGPFLEDLSIRVPAKKPSPIVLSPQGSLGEELNDTGNLSSPFAGSRASQNTENSLLAPDSEEKECVWDASLPPTPSGDVSPHSSIDSIGVVKAMSIANSCASTYRSDAITSDGMLSLDRNFDSIKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNLTGSANKPHKGNDPRWNAILAVRLRDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCTVLPTLIRAFDGDPSKRAGGAFCVQPACIEPSSVCIQPACFIPRLFPQKNKKSRKPRAEPGFPSSRLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVENEPPPPPPMKVGPAIDAVGFGSTSKRMSGNNEMKPGGKYLDFEFF* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5177 765 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 69 765 - -
Psa4g5177 765 CDD STKc_phototropin_like 365 715 - -
Psa4g5177 765 Gene3D Transferase(Phosphotransferase) domain 1 595 716 - -
Psa4g5177 765 ProSiteProfiles Protein kinase domain profile. 367 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g5177 765 MobiDBLite consensus disorder prediction 308 340 - -
Psa4g5177 765 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Psa4g5177 765 Gene3D Transferase(Phosphotransferase) domain 1 451 517 - -
Psa4g5177 765 MobiDBLite consensus disorder prediction 216 232 - -
Psa4g5177 765 SUPERFAMILY Protein kinase-like (PK-like) 348 727 IPR011009 -
Psa4g5177 765 MobiDBLite consensus disorder prediction 308 343 - -
Psa4g5177 765 MobiDBLite consensus disorder prediction 216 240 - -
Psa4g5177 765 Gene3D Phosphorylase Kinase; domain 1 365 450 - -
Psa4g5177 765 PANTHER FLIPPASE KINASE 1-RELATED 69 765 - -
Psa4g5177 765 SMART serkin_6 367 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g5177 765 Pfam Protein kinase domain 596 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g5177 765 Pfam Protein kinase domain 368 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5177 Psa-Chr4 444170194 444174427 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5177 1 765 AGC Kinase Gene Family AT2G44830 65.952 0.0 949
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Psa4g5177 Pkinase 2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5177 - - mtr:MTR_8g006870 1382.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g5177 4 444170194 444174427 Psa4g5177 4 444170194 444174427 ECH
Psa4g5177 4 444170194 444174427 Psa3g2293 3 199490040 199493731 PCT