Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5172 ATGTCAAACATATGGATATGTAAATTGTTATCATCATTAATAACATTGTTGATAATTTCATCTTGTGTCTATGTATGTGAAGGTCAAGAAGCGATGGCGACGGCTCTTCCTCCGGCCGCAGAAACATGTAATGGAGTTTTTATTTCCTACCAACTAATGGACCGAAGGAAGGAATTTCCCCGTGTTAAGAACGTCACGGCGCAATCATGGGCCTTTAATGCGACCGCGAAGGTTCTCAACACGGGGAAAGATGTTGTTAAATCATGGAAGTTGTTTATAGGATTTCAACATGATGAGATCCTTATCTCCGCCGACGGAGGTATCCCGTTTGAAGCGGGAGAATTTCCCGCGGATGTCGGAAATGGGACAACCTTAGTTGGAAGTAATTTAGCAGATTTGGAAACTTCTATTAATACAGCTAATGATATGAACCAAATTCAAGCATTGATTAAAATATCTGGTACACAGTTTGGAGTTAAACCACCTGGAGTTCCATTGCCTAAAACCATCAAGTTGGACAATGATGGATATAAGTGCCCTCGACCAACTACGCGTAAGAGAATCATGCAGGCATGTTGTAACAGAGATCCAAAATCCAAAAAAAAACTTATAAAGACAAAATTCATACCACGTCAAAAAGGTGACCTAACAATATCCTATGATGTTGTTCAAGCATATGACAACAACTATCTTGTTCAAGTAACAATGGAGAATCATAGTCCTTTAGGACGTTTAGATCGTTGGAACCTAACATGGGAATGGACAAGAGGTGAGTTCATACAACAAATGAAAGGCGCATTCACGCGCGAGATCGAGTATACAGGTTGCATCTTTGGTCCTCCAGGACAATATTACAAAGACATGGATTTCTCTAAAGTTATGAACTGTCAAAAACATCCTGTGATCAGTGATATGCCACCAGAAAAATCTAATGATACAGAACTTGGTAAAATTCCGTTTTGTTGTCGAAACGGTACGCTTTTACCTATAATCATGGATCCATCACAATCCAAATCCATTTTTCAAATGCAAGTTTTTAAATCTCCACCGGATTTGGATAAAACTTCTCTTTTTCCACCAGCAAAATGGAAAATAACGGGTGTTCTTAACCCGGCTTATGAATGTGGACCGCCGTTGAAAGTCCAACCGACAATATTTCCGGAGACTAGAGGATTGGATGCTATAACCTATGCTATTGCAAGTTGGCAAATAGTTTGCAATATAACAAAACCTAAACAAAGAACAACTGGATGTTGTGTTTCCTTTTCTGCTTTCTATAATGAATCTATTGTTCCATGCAACACGTGCGCATGTGGTTGCGATGAAGACGAAGATAACGGCCGTTGTAACCCTAATGCAAAATCAATGCTTTTACCTTCAGAAGCACTTCTTGTTCCTTTTGAAAATCGAACGAAGAAGACGGTTGCTTGGGCTAAGTTAAAGCATTTTCATGTACCTAGAAAGTTACCATGTGGTGATAATTGTGGAGTTAGCATAAATTGGCATGTAGCTTCTGATCATAAAGGTGGTTGGAGTGCAAGAATCACTTTGTTTAATTGGAAGCCCTATTTTTTTAAGAATTGGTTCACTGCCTTGCAGTTCAAGAAAACTGTTTCTGATGGTTTTGAGAAAGTTTATTCTTTTAATGGAACATTGCTTAGGAAAATCAACAATACTATTTTCATGCAAGGAATAGAAGGATCAAACTATTTGATAGGTATAGATAATGAAACAAATCCAAAGGTTCCTGGAAAACAACAATCTGTTATTTCTTTTACAAAAAAGTTTATGCCAACTATGCAAATAGCTAAAGGTGATGGCTTTCCTACAAAGGTGCTTTTCAATGGAGAAGAGTGTTCTCTTCCAACTCAATTTCCTATGAGAAGTGGAAATCAACATAATGTATATTTAGTACAACAAGTGTTAATCTTAGTTTTAGCTTTTACAATGATTCAAATATTGTATTAG 1968 0.3755 MSNIWICKLLSSLITLLIISSCVYVCEGQEAMATALPPAAETCNGVFISYQLMDRRKEFPRVKNVTAQSWAFNATAKVLNTGKDVVKSWKLFIGFQHDEILISADGGIPFEAGEFPADVGNGTTLVGSNLADLETSINTANDMNQIQALIKISGTQFGVKPPGVPLPKTIKLDNDGYKCPRPTTRKRIMQACCNRDPKSKKKLIKTKFIPRQKGDLTISYDVVQAYDNNYLVQVTMENHSPLGRLDRWNLTWEWTRGEFIQQMKGAFTREIEYTGCIFGPPGQYYKDMDFSKVMNCQKHPVISDMPPEKSNDTELGKIPFCCRNGTLLPIIMDPSQSKSIFQMQVFKSPPDLDKTSLFPPAKWKITGVLNPAYECGPPLKVQPTIFPETRGLDAITYAIASWQIVCNITKPKQRTTGCCVSFSAFYNESIVPCNTCACGCDEDEDNGRCNPNAKSMLLPSEALLVPFENRTKKTVAWAKLKHFHVPRKLPCGDNCGVSINWHVASDHKGGWSARITLFNWKPYFFKNWFTALQFKKTVSDGFEKVYSFNGTLLRKINNTIFMQGIEGSNYLIGIDNETNPKVPGKQQSVISFTKKFMPTMQIAKGDGFPTKVLFNGEECSLPTQFPMRSGNQHNVYLVQQVLILVLAFTMIQILY* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5172 655 PANTHER COBRA-LIKE PROTEIN 7 8 653 - -
Psa4g5172 655 Pfam COBRA-like protein 230 409 IPR006918 GO:0010215|GO:0031225
Psa4g5172 655 PANTHER COBRA-LIKE PROTEIN 7 8 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5172 Psa-Chr4 443975784 443978701 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5172 12 651 COBRA Gene Family AT3G20580 55.115 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5172 - - mtr:MTR_5g005590 1070.84