Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5168 ATGGTAGGGGGTGGAAATGGAGAGTGGCCTGGTGGGGGGTTTAGTCCGGGTCCGATGACTCTGATTTCGAGCTTGTTTGGAGATAACGATGACGGTAAGACATTCTCAGAGCTTCTCGCCGGTGCTATGTTGGATGTGGAGCATGGAGGAGGAAGAGACGGTGGCTTGTCACCGTTGGCCATGTTTGCTTCTCCACCTCAGCAATCACTAGCACAAGCCTATTCAAATGTTCAAAACCAATTTGAACATCCATTTTCTTCATCAATAGTGCCTACAAATACCTCATTCACACAACTTCAAGCAGTTACATTCAACAACATTGCACAACAACGCATACCAAACTCTAAGGAACCAATAGCAAAATCTGTTGATTATTCCTCTAACACAGAACAAACATCACAACAGTCTTGTTCTGTGAATGTCGACAAAGCTAACGACGACGGCTACAACTGGAGGAAGTATGGACAGAAACAAGTCAAAGGTTGCGAGTTTCCTCGAAGCTATTACAAGTGTACACATCCAAGTTGTCCTGTGAAGAAAAAAGTCGAACGCGATCTCGTTGATGGACATGTAACTCAAATTATTTACAAAGGAGAGCACATTCACGAACGCCCTCGTCCAAGCAAGCTCACAGAGGATAATTCAAATGTGCAACAAGAGTTGTTAGGAACAAGTGACAGTGACGAAGAAAAAGATCATGAAACTGAGAAAAATTATGAACCTGATCGCAAAAGAAGGAGTGCTGTCTCAAAGCCTAGAATCATTGTGCAAACAATAAGTGATGTAGATCTGTTAGAGGATGGATATAAATGGCGCAAATACGGGCAGAAAGTTGTCAAAGGAAATCCGCATCCAAGGAGTTATTACAAATGCACAAGCCCGGGTTGCAATGTTAGGAAACATATTGAGAGGGTTTCAACGGATCCTAAAGCAGTAATGACAACATATGAAGGAAAACATAATCATGATGTGCCAGCAGCTAAGACTAATAGCCACACCATTGCCAACAATAATAATGCATCACAGCTAAAATCACAAAATGTCATACTTGCAATGCATAATGTCGACAGAAGAGGTCAGCAGCAGCCTTCAGCAGTGGCACGTTTAAGGTTGAAGGAAGAGCATAAAGCATAG 1134 0.4259 MVGGGNGEWPGGGFSPGPMTLISSLFGDNDDGKTFSELLAGAMLDVEHGGGRDGGLSPLAMFASPPQQSLAQAYSNVQNQFEHPFSSSIVPTNTSFTQLQAVTFNNIAQQRIPNSKEPIAKSVDYSSNTEQTSQQSCSVNVDKANDDGYNWRKYGQKQVKGCEFPRSYYKCTHPSCPVKKKVERDLVDGHVTQIIYKGEHIHERPRPSKLTEDNSNVQQELLGTSDSDEEKDHETEKNYEPDRKRRSAVSKPRIIVQTISDVDLLEDGYKWRKYGQKVVKGNPHPRSYYKCTSPGCNVRKHIERVSTDPKAVMTTYEGKHNHDVPAAKTNSHTIANNNNASQLKSQNVILAMHNVDRRGQQQPSAVARLRLKEEHKA* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5168 377 SUPERFAMILY WRKY DNA-binding domain 145 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa4g5168 377 Pfam WRKY DNA -binding domain 146 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa4g5168 377 Pfam WRKY DNA -binding domain 266 323 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa4g5168 377 Gene3D WRKY domain 126 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa4g5168 377 Gene3D WRKY domain 250 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa4g5168 377 MobiDBLite consensus disorder prediction 224 249 - -
Psa4g5168 377 SMART WRKY_cls 145 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa4g5168 377 SMART WRKY_cls 265 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa4g5168 377 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 217 375 IPR044810 GO:0003700
Psa4g5168 377 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 61 218 IPR044810 GO:0003700
Psa4g5168 377 ProSiteProfiles WRKY domain profile. 260 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa4g5168 377 MobiDBLite consensus disorder prediction 221 250 - -
Psa4g5168 377 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 217 375 - -
Psa4g5168 377 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 61 218 - -
Psa4g5168 377 SUPERFAMILY WRKY DNA-binding domain 257 325 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa4g5168 377 ProSiteProfiles WRKY domain profile. 140 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5168 Psa-Chr4 443919721 443922933 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5168 11 39 WRKY Transcription Factor Family AT2G03340 68.966 1.27e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa4g5168 WRKY 8.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5168 - - gmx:100127369 402.134