Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5157 ATGGGACCAAGGGGTTCCGCTCTTATTTGTGGGTATACCAATTATCATAGGCAGCTAGAGTCGAGTTTGGCTAATTTGAAAAAGAAGGAGGACTGCCTTCTTTGTCCCACTGGGTTTGCTGCCAATATGGCCTTGATGACAGCAATAGGAAGTATTGGTTCTCTCTTAGCTGGGAATAGCATACTTTCAGAAGATGAAAAGATTGCCATATTTTCTGATGCATTAAACCATGCATCAATAATTGATGGTATTCGTCTTGCGGGTCGGCAAAAAGGTGCAAAAGTGTACATATATAGACATTGTGATATGTCCCACCTCAATATGCTCCTATCTCATTGCAGTATGAAGAGGAAAATTATGGTAACTGACAGCTTGTTTAGCATGGATGGAGACTTTGCACCAATGGTTGAGTTTGCAAAACTTCGCAAGAAGTATGGCTTTTTACTAGTCATCGATGATGCTCACGGAACATTTGTTTGTGGTAAAAATGGCGGTGGTATTGCTGAGGAGTTCAACTGTGAGAAGGATATGGACATATGCATTGGTACCCTAAGTAAAGCCGCCGGCTGCCATGGAGGATTTATAGCATGCAGCAAAACATGGAAGTTATTAATACAGTCAAGAGGTCGTTCATTTATATTTTCAACTTCTACGCCGGTTCCAGTTGCTGCTGCTGCTCATGCTGCTGTTAGAGTTGCAATATCAGAGACATGGCAAAGAAAGGCTATTTGGAATCGGGTGAAAGATTTTCATTTGCTTACGGGAATCCCTGTTACAAGTCACATTATTTCCCTAATAGTTGGCAGTGAAGACAAAGCACTGCAAGCAAGCCGACATTTACTACAAGCTGGCTTCCACGTGAATGCGATCAGACCACCAACAGTGCCTCCTAACTCATGCAGGCTGCGAGTGTCCCTAAGTGCAGTCCATACAAGGGAACATTTGGAAAACTTAGCAGCTGCATTCTCCAGTTGCATCAATTTCCAAGACACCCGCATTTATGACTGCAATGGCTATGCAAGACCAACCAAAACCACCGTCGCCAACGGCAAGTGTTATCATGCAACCGTCAACATTCATCAAGCGGCATTCCATGCCCAAGTGAAACAATTGGAGTGGACCTGCATGAACAATATGATACACACTACATCAGAAAAACATGAAGGAAAGTCAATGGATACAAGTAATGGAAAAAAGCCGTGCTTTGGAAGCATCAAACAGCCGGATGGTTTCAATGTAAGCAACTCAGAAGCATCCGTTAAGAGAGAAATCAGTGCGGCATGTGGTGATGAATCTCTTGTTTTGAATAAGTCAACACATAGATTTACTGAGTCACCCTCCAAAGATAATTTCGGGAACCAATCTGAACATAGGTATCCTGTGAACAATGTACCTGATCCTCATCAGCAGCTTCTACCCCAAACCATTCAAAATCATGTTGCATTGGCCCGTGATATGTATCTGTTACGGTTGTACAGTGGAATTGATGAAAATTCAATTGGAGCATGTGCTCAACTTGTGTTTGCACCAATAGACGAATCCTTTGCCGACGATGCGCTTTTGCTTCCTTCCGGTTTTCGAGATATTCCCTTGGATCCTAAATCAGATGTTCCGGCTACGTCAAGGACATTGGATTTGGCATCAACACTTGAAGTGGGATCTAGTAATGCCCGAGCAGTTGGTGAAGTTGGTGATGCATACAACCTTAGAAAATCAGATGTTCCGGCTACGTCAAGGACATTGGATTTGGCATCAACACTTGAAGTGGGATCTAGTAATGCCCGAGCAGTTGGTGAAGTTGGTGATGCATACAACCTTAGATCTGTCCTTACTATCGCATTTCAGTTTACCTTTGAGAATCATCTGCGTGACAATGTTGCTGGTATCTTTCGTGGAGAACCAGAGTTCCGGGAAAATGAAATATATACATGA 1932 0.4301 MGPRGSALICGYTNYHRQLESSLANLKKKEDCLLCPTGFAANMALMTAIGSIGSLLAGNSILSEDEKIAIFSDALNHASIIDGIRLAGRQKGAKVYIYRHCDMSHLNMLLSHCSMKRKIMVTDSLFSMDGDFAPMVEFAKLRKKYGFLLVIDDAHGTFVCGKNGGGIAEEFNCEKDMDICIGTLSKAAGCHGGFIACSKTWKLLIQSRGRSFIFSTSTPVPVAAAAHAAVRVAISETWQRKAIWNRVKDFHLLTGIPVTSHIISLIVGSEDKALQASRHLLQAGFHVNAIRPPTVPPNSCRLRVSLSAVHTREHLENLAAAFSSCINFQDTRIYDCNGYARPTKTTVANGKCYHATVNIHQAAFHAQVKQLEWTCMNNMIHTTSEKHEGKSMDTSNGKKPCFGSIKQPDGFNVSNSEASVKREISAACGDESLVLNKSTHRFTESPSKDNFGNQSEHRYPVNNVPDPHQQLLPQTIQNHVALARDMYLLRLYSGIDENSIGACAQLVFAPIDESFADDALLLPSGFRDIPLDPKSDVPATSRTLDLASTLEVGSSNARAVGEVGDAYNLRKSDVPATSRTLDLASTLEVGSSNARAVGEVGDAYNLRSVLTIAFQFTFENHLRDNVAGIFRGEPEFRENEIYT* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5157 643 Gene3D - 1 233 IPR015421 GO:0003824
Psa4g5157 643 Gene3D Aspartate Aminotransferase, domain 1 234 330 IPR015422 GO:0003824
Psa4g5157 643 Pfam Aminotransferase class I and II 6 321 IPR004839 GO:0009058|GO:0030170
Psa4g5157 643 PANTHER - 1 328 - -
Psa4g5157 643 SUPERFAMILY PLP-dependent transferases 2 326 IPR015424 -
Psa4g5157 643 PANTHER CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE 1 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5157 Psa-Chr4 443666446 443668562 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5157 480 631 Homeobox Transcription Factor Family AT2G34710 50.000 4.87e-31 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5157 K00652 - gmx:100776585 596.66