Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5148 ATGGCGACGCCGGAATCAAGCCTCGATCCAATTCTCTTCCTTCAAGAACAATCATGGCACCTCCTATCACTACTCCTCCAGATCGGTCACCCAGTCGATGCAGACTATTTATCTTCCCGTTGCGGCTTCTTCAATGTTTCTTCCGATTTCGTCCGTTACGTAGCATCTCTTCCTGATTCTCCTCTCGCCGTTAACAGTAACGGTCTCCTTACTCCTTCCCTTAAAGCTGTTTTTGCCATCGCTAGGTTTTTCTCATTTCAAGTCCCTATTTCAGCTTCGTCTTACTCCCGAAAACGTAAATCGGTTTTATCACTCCCTGGAGGTGGAAGAGATCCGAAACGACTTGCAATTGGCGACAAAGTTCCGGAAATTTTCGTCAAGAGTTTTGTTGATCCTTCTGCTGAGGCTATGATGAGAAGAAGCTTTTGTACAATGAAATTTGAGTCTCGGATTGTGCATGATGGGAGTTATATGATTCCTATATGTATTGATACAGTTGGAGAGTGTTCAGGTTGGTCAGAACCAAATTTTGGATATAGAGAAGCTGATAATGATGGCACAACAAACACAGCCCATGAAGAGATTTCTGACTCTCTGATCAAAACCACTGAGTGTTTTTTCATTTGTGATAGTGGTTTGAAGAAGGTTGAGGATTTAGATGGGCTCCCGGGGCATAATCCTGCTGCGATTCTTGCTCCACCAACTAGTGTCCAAGATCAATCACTTTGTAATGAGGGCATTGTCGTTGGTATTGAGTCAGGGAAGAAAGTGGATTGCTTTGACACATTTGGGAATGAGTATCGTGAACTAAACATAACCCATTATGTGGATGATGTTGATGTTTGTAGAAATAATGCCGGCAAAGATCAACAAAGTGATTCTATTGAAAAAAATATAGAATATGAAAAAGGTTTAAAGGAAGAAGTGATTAATTATGACAAAGATGAAGGAAAGGAAGATGTTGCTCAGAGTTGTAAACCTGTTGTATTTGGAGAAGAACCAACCAAAGTTTTGGAATTTAAAAAGGGTACACATGTAAAAGATTTGGATAAAAACAAGAGAGTGAGAAACATGGTGACTCGCTCCACCAATAAAGCTGCACATACCTCTGCAAATCCAAAGCCAGTTCCGAAAACTTCTCGCATATCGAAGGGAGGACTGAAATATGATCAACACTCAATGACTCAAATTCTAGCAGAGTCACTAGCCTGTAACAAACTTGAGGATGCTCCAAAAGTAATTGATCAATGTAAAGATGATCAGAACATTGTTGCAAAAAACAAACTAAAACAAAATCGTAAAGAAAACTTAGCTGAAGATAACTCCATGACTTCTAAGGTGGAGAAAAAAACATTCCCATCTTTTGAATCTTTTAAAATAGAGGAAGAAGAGGGTTCAGGTGGTTATGGCATTGTTTACCGAGCTCAAAGAACAATTGATGGAAAGAGACTTGCTATTAAATGCCCTCATACCAATGCTCATAAAAATCATGTAAATAATGAGCGGAATATGCTTGAGCGTTTTGGGGGTAAAAACTTTATTATAAAGTTTGAAGGTTCTTTCAAAAGTGGCAACACTGACTGCTTTGTTTTAGAACATGTTGAGCATGAGAGACCTGAGGTTTTGAAAAGAGAAATTGATATCAACGAGCTTCAGTGGTATGCGTATTGCATGTTCAAGGCACTTGCGTGCTTGCATAAAGAGGGAGTCGTCCATAGAGATGTCAAACCTGGAAACTTCCTTTTTTCTCGAAAGCTAAAGAAAGGCTATCTTATTGACTTCAACCTTGCCATGGATTTAAAGCAGAAGTACAACTTTGGAAGTAAATCCAAACCAAGTCTTGGTGCATCCAATAATATTCCCCTCCCTTCTGGTCCTTCCCCCCTGGTCCAAGACAAGAATCTTGGAGGAATCAAGTCTCTAACATCCAATAGAAGGGAGCTAGCAGATCACAGGAAATATTCTGACATTAATAGGCATTTGAAGCCTAAGGCTAATGCTGGTCATCTGAAAAATTGTACGGATAAGGCTGTTGTGGGTTTACGAAGAGCACAAGGAACAGATGGGTCAGGTATAACCTCTGCCAAAGATGTTACCAGCACTAAAACAGCTTCTGCCGATAGGCTTCGAGAACCCTTACCTTTCCGAGGAAGAAAGGAGCTTATCAGCCTTGTGCAGAATTCCATGCAATGTGCAACCAGTAGTTCAATGAAAAGTCCTTCTTCTCAGAGGAAAAGGGTTACTGCTCCTTCAGGCAAGGTAGACGGCAGGACACTTTATCTTACGCCGATGCCTATACATTCATCTACTGTTAATTTGGGGTTATTAAGAAGTAAAGGTGATGGAAAACATAAAAGAGAGGGTCCATGTGTTGGAACAAAGGGATTCCGTGCTCCAGAGGTTTTGTTCAGGTCTCAGTTTCAGGGACCAAAGGTTGATATTTGGTCTGCTGGAGTCACTCTACTATACCTGCTGATTGGGAAAACTTCTTTCCCTGGCGAACCAGAACAGAGTTTAAAAGAAATTGCCAAATTGCGGGGCAGTGAAGAACTTTGGGAAGTGGCCAAGCTGCATGACCGCGAAGCATCATTTCCACTGGAGTTATTTGATGACCAATACTTGCTTTCATACGACATAGAAAGCTGGTGCAAGACTCACACAAAGAGACCAGAGTTTGTTGATCAAGTTCCAAAATCCTTGTTTGATTTAATAGACAAGTGTCTAACAGTAAACCCAAGGAGTAGGATTAGTGTTGAAGAAGTTCTAAGGCATGAGTATTTTGCCCAATGTAATGACATCATGAGAAAGACAAGGATCATTCGACGAGGTCTCGGCTTAGAAACTTCAACTTCCAGAGCAGTCTGA 2865 0.4094 MATPESSLDPILFLQEQSWHLLSLLLQIGHPVDADYLSSRCGFFNVSSDFVRYVASLPDSPLAVNSNGLLTPSLKAVFAIARFFSFQVPISASSYSRKRKSVLSLPGGGRDPKRLAIGDKVPEIFVKSFVDPSAEAMMRRSFCTMKFESRIVHDGSYMIPICIDTVGECSGWSEPNFGYREADNDGTTNTAHEEISDSLIKTTECFFICDSGLKKVEDLDGLPGHNPAAILAPPTSVQDQSLCNEGIVVGIESGKKVDCFDTFGNEYRELNITHYVDDVDVCRNNAGKDQQSDSIEKNIEYEKGLKEEVINYDKDEGKEDVAQSCKPVVFGEEPTKVLEFKKGTHVKDLDKNKRVRNMVTRSTNKAAHTSANPKPVPKTSRISKGGLKYDQHSMTQILAESLACNKLEDAPKVIDQCKDDQNIVAKNKLKQNRKENLAEDNSMTSKVEKKTFPSFESFKIEEEEGSGGYGIVYRAQRTIDGKRLAIKCPHTNAHKNHVNNERNMLERFGGKNFIIKFEGSFKSGNTDCFVLEHVEHERPEVLKREIDINELQWYAYCMFKALACLHKEGVVHRDVKPGNFLFSRKLKKGYLIDFNLAMDLKQKYNFGSKSKPSLGASNNIPLPSGPSPLVQDKNLGGIKSLTSNRRELADHRKYSDINRHLKPKANAGHLKNCTDKAVVGLRRAQGTDGSGITSAKDVTSTKTASADRLREPLPFRGRKELISLVQNSMQCATSSSMKSPSSQRKRVTAPSGKVDGRTLYLTPMPIHSSTVNLGLLRSKGDGKHKREGPCVGTKGFRAPEVLFRSQFQGPKVDIWSAGVTLLYLLIGKTSFPGEPEQSLKEIAKLRGSEELWEVAKLHDREASFPLELFDDQYLLSYDIESWCKTHTKRPEFVDQVPKSLFDLIDKCLTVNPRSRISVEEVLRHEYFAQCNDIMRKTRIIRRGLGLETSTSRAV* 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5148 954 MobiDBLite consensus disorder prediction 361 377 - -
Psa4g5148 954 PANTHER CELL DIVISION CYCLE 7-RELATED PROTEIN KINASE 431 932 - -
Psa4g5148 954 SUPERFAMILY Protein kinase-like (PK-like) 444 932 IPR011009 -
Psa4g5148 954 MobiDBLite consensus disorder prediction 732 751 - -
Psa4g5148 954 MobiDBLite consensus disorder prediction 685 706 - -
Psa4g5148 954 Gene3D Transferase(Phosphotransferase) domain 1 421 614 - -
Psa4g5148 954 ProSitePatterns Serine/Threonine protein kinases active-site signature. 570 582 IPR008271 GO:0004672|GO:0006468
Psa4g5148 954 MobiDBLite consensus disorder prediction 732 748 - -
Psa4g5148 954 Gene3D Transferase(Phosphotransferase) domain 1 768 942 - -
Psa4g5148 954 ProSiteProfiles Protein kinase domain profile. 458 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g5148 954 PANTHER CASEIN KINASE-RELATED 431 932 - -
Psa4g5148 954 SMART serkin_6 458 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g5148 954 Pfam Protein kinase domain 460 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g5148 954 Pfam Protein kinase domain 790 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g5148 954 MobiDBLite consensus disorder prediction 687 706 - -
Psa4g5148 954 MobiDBLite consensus disorder prediction 361 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5148 Psa-Chr4 443387613 443395266 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5148 772 932 MAP Kinase Gene Family AT3G45640 27.059 6.14e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Psa4g5148 Pkinase 3.3e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5148 K02214 - gmx:100795742 1048.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g5148 4 443387613 443395266 Psa4g5148 4 443387613 443395266 ECH