Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5144 ATGGAAGGAGAAAGAGATGCTCCTAATTATGAACTTCAAGTTTCATTCACAAACACTCCTCAAACCATCCATGAAATGAGTTTTGTTCAATTTGAAGATAATCATGTTCTTAGCTTCTTGTCTCCATCTACACAATCTCAACCTTCTCAGCTTTCTCAATCTCTAAACTCCGGCGGTAGCTCCACCACCGCCGCTACCACTGCAGCTGTCTCAACAACCACCGCAGCCGCCGGATTCAGCCCTAACGATCTTGTCACTAGAACTCCTTGGAGTAATGAACAGGTGAGAACTCTAGATCCCAAAGCTGTTGTAAGTGATGAGAATTGCACTGGAAATACTAGTGATGGCAATAACACTTGGTGGAGGAGTGGAGGAAGTGAGAAGAACAAGGTGAAAGTGAGGAGGAAGCTAAGAGAGCCAAGGTTTTGTTTTCAGACAAGAAGTGATGTAGATGTGCTTGATGATGGTTACAAATGGAGGAAGTATGGTCAGAAAGTTGTTAAGAATAGTCTTCATCCAAGAAGTTATTACCGTTGCACACATAACAATTGTCGGGTGAAAAAAAGAGTTGAACGACTCTCAGAAGATTGTCGTATGGTGATAACCACTTATGAAGGAAGACACAATCACTCTCCATGCGACGACTCTAATTCTTCAGAACACGAATGTTTTACCTCTTTCTGA 684 0.4225 MEGERDAPNYELQVSFTNTPQTIHEMSFVQFEDNHVLSFLSPSTQSQPSQLSQSLNSGGSSTTAATTAAVSTTTAAAGFSPNDLVTRTPWSNEQVRTLDPKAVVSDENCTGNTSDGNNTWWRSGGSEKNKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5144 227 ProSiteProfiles WRKY domain profile. 148 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa4g5144 227 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 11 225 - -
Psa4g5144 227 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 11 225 IPR044810 GO:0003700
Psa4g5144 227 Pfam WRKY DNA -binding domain 154 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa4g5144 227 SMART WRKY_cls 153 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa4g5144 227 Gene3D WRKY domain 139 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa4g5144 227 SUPERFAMILY WRKY DNA-binding domain 145 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5144 Psa-Chr4 443337809 443342213 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5144 3 227 WRKY Transcription Factor Family AT2G44745 59.227 2.49e-75 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa4g5144 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5144 - - var:108347245 362.073