Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5128 ATGGAAATTGTTGAGATAAGCACAATAATGAAAGTGTTGTTTGGAGCAATTTTGGTGATTTTGGTTCATATTTTGAATATTTTGGTGTTGAGGCCAAAATCAGTTAGAGCAAAGCTTCAAAGACAGGGTATCAATGGTCCTTCTCCTCATTTCTACCTTGGCAATATTCCAGAAATAAAGAGACTTTTACAAGAAAACAGCAAAGATGGTGTTTCAACATCCATTTCTCATAACTGGCATTCTAATCTCTTCCCTCACATTTACAACTGGAAAAAACAATACGGTCCCATTTTCGTGTTTTGTTCTGGGAGTATACAATGGTTAGTGGTGACAGATATAGATACAGTGAAGGAGATTGTCCTACATACATCTTTGAATCTTGGGAAGCCATCGTTTTTATCCAAAGATAATAGGCCACTCCTTGGACAAGGTATATTATCATCAAGTGGCCAATATTGGGCTCATCAAAGAAAGATAATTGCCCCTGAACTATACCTAGAAAAAATGAAGGCAAAAGTCAATATGATAATGGAGTCAACAAATGGACTGCTAAGATTATGGGATACCAAACTGAATAAAGATGGAGACACTTTAGAGATTGAAATTGATCAAGACTTGCGAAACTTATCATCTGACATTATTGCAAAAGCTTGTTTTGGAAGCAATTATGTTGAAGGAAGAGAAATATTCACAAAGCTTAGAGAACTTCAAAACCTCATTTCCAAGATATTTGCTGGAATTCCAGGCTATAGATATTTGCCAAACAAAACCAATAGACAAATGTGGAAACTAGAAAAAGAGATAAACTCCAAGATATCAAAGCTCGTCAAAAAACGCCAAAACCATGCTCGAGAGGAACAAGATCTTTTACAAATGATACTCGACAGTGCAAAGAAATGCGACAGTGGTGATAGTTTCTTGCCGAATTCGATCTCACGAGACATATTTATAATAGATAACTGCAAAAATATATTTTTTGCTGGATATGAGACTACTGCAATTACAGCATCATGGTGCTTGATGTTGTTATCTACACACCAAGAATGGCAAGATCGTGTTCGCGCCGAAGTGCTCGAAATTGTTGGAAAGGATGGTAATATAGATGCAACTATGCTTAAAAGCTTGAAAATGTTAACTATGGTGCTTCAAGAGACATTGAGGCTTTATCCACCAGCGTCATCGGTTAATCGAGAAGTTTTCAAAGACATTGTTTTCAAAGGTCTCTTAGTTCCGAAAGGAATGAACATTCACATTCCAATGCCGATTTTGCATCAAGACTCGAAGCTTTGGGGCGATGATGCACATGAATTCAATCCGGAAAGATTTGCGAATGGAGTGCAAGGAGCGTGCAAGATTCCACAAGTTTACATGCCATTTGGAATGGGGTCTCGTGTATGTGTAGGACAGCATTTGGCCATGGTTGAGTTGAAGGTGATCGTGTCTCTCATTCTGTTGAAGTTTCGATTTTCTGTATCGCCGAGTTATCGTCATTTGCCTTCCTTCCACATGCTTATTGAACCCGGACATGGAGTTGTTCTCAACATGACAAGAATCTAA 1557 0.3802 MEIVEISTIMKVLFGAILVILVHILNILVLRPKSVRAKLQRQGINGPSPHFYLGNIPEIKRLLQENSKDGVSTSISHNWHSNLFPHIYNWKKQYGPIFVFCSGSIQWLVVTDIDTVKEIVLHTSLNLGKPSFLSKDNRPLLGQGILSSSGQYWAHQRKIIAPELYLEKMKAKVNMIMESTNGLLRLWDTKLNKDGDTLEIEIDQDLRNLSSDIIAKACFGSNYVEGREIFTKLRELQNLISKIFAGIPGYRYLPNKTNRQMWKLEKEINSKISKLVKKRQNHAREEQDLLQMILDSAKKCDSGDSFLPNSISRDIFIIDNCKNIFFAGYETTAITASWCLMLLSTHQEWQDRVRAEVLEIVGKDGNIDATMLKSLKMLTMVLQETLRLYPPASSVNREVFKDIVFKGLLVPKGMNIHIPMPILHQDSKLWGDDAHEFNPERFANGVQGACKIPQVYMPFGMGSRVCVGQHLAMVELKVIVSLILLKFRFSVSPSYRHLPSFHMLIEPGHGVVLNMTRI* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5128 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Psa4g5128 518 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g5128 518 PRINTS E-class P450 group I signature 209 227 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g5128 518 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g5128 518 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g5128 518 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g5128 518 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g5128 518 Gene3D Cytochrome P450 32 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g5128 518 PANTHER CYTOCHROME P450 FAMILY MEMBER 9 513 - -
Psa4g5128 518 SUPERFAMILY Cytochrome P450 78 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g5128 518 Pfam Cytochrome P450 81 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g5128 518 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 513 - -
Psa4g5128 518 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g5128 518 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g5128 518 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g5128 518 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5128 Psa-Chr4 442712629 442717143 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5128 116 515 Cytochrome P450 AT5G24900 43.276 3.55e-119 355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g5128 4 442712629 442717143 Psa4g5128 4 442712629 442717143 ECH