Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5116 ATGTCCTTCAATCAATCAAAAACGGAAAAGAACGACGCCGCGTATCGAAAGTCCGGGCGATCGTCTAGCTTCAATCAGCAGAGAGGTCCTTCAGCCGCATATGGAAGGGGCAGCGGCGGGCCCGCGCCGTCCAACAACTCTGCTAATCCACTCTCCTCTAATAGGAGTTTTAACAAGAAGTCTAATAATGCACAAGGTGGGCAATATAGGGTGAACCCTTCCCAAGTGAATTCAACAGAGTCAAACAGTGCTTCTGCTGCTCGAACCCTACATAATGGTACTCATGTACAACCACATTTGCATGGAGCATCTGATGGGCCGGTTGCAAAGGCATCTGAATCAACTGTTGCACAGAGGAGCCCTAGAGTTGTTCCAAATCCAACTTCTCAACCACCTCCCGTGAGCTCTGATAAAACCGCTCCTACAGGCCCTGCTAAGGGAGATGCATCAAAGGCATTCCCTTTTCAGTTTGGATCGATTGTTCCTGGCTTTATGAATGGAGTGGCTATTCCCGCTCGTACAAGCTCAGCTCCTCCTAATTTAGATGAGCAGAAGCGTGATCAGGCTCATCATGACTCTGTTAGATCTGTGCCTTCAGTGCCAATACCTCCTGTTCCAAAGCAGCAGCAGCAACAGCAACAACCACCTAGGAATGATTCAGGTGTAACTGAGAAATCTAATGCCAGGGAGACTAATCTGGGGACTAAGGCTAAGAAGGACCCTCAAGTTCCAGCTATGATCCCGGCAAGCCAGATGCTGAAGCCTTCTGTTGTTCCTGCACCTGGGATTTCAATGTCTACACCATTTCAGCAGTCACATGCATCTTTACAGTTTGGTGGTCCTAATCCACAGATTCAATCTCAGGGGATGTCCTCGACACCCCTCCATCTTCCTATACCAATGCCTATACCAATGGGGAACGTTGCACAAGTGCAACCGCCGGTTTTTGTTCCTGGTCTGCAGCCTCATCCAATGCACCCTCACGGGATCATGCATTCAGGCCATAACTTAAATTTCGCTCATCAAATGGGCCATCAGATGCCCCATCAAATGAGCAACATGGGCATTGGCATCAGCCCTCAATATCCCCAGCATCAGGCTGGAAAATATACTCGGAAAACTACTACAGTCAAAATAACTCATCCTGAAACGCACGAAGAGCTCAGGCTTGATAAAAGGGCAGGTGGATATTCAGATGGTGGGTCATCTGGTGCAAGGTCACATCCTAATGTACCTTCCCAATCCCAACCTGTTAAATCCGTTGCCGTTTCTCAGCCTACAAATTATCATCCTTATAGTTCCAGTCCTCCCTATTACCAACCTTCTAGTTCTCTTCCATTAACAAGTAGCCAGATAACTCCCAACGCTCAGCCACCAATATTTAATTATCCTGTGCACAATGGTCCACAAAATGTGGCTTTCGTTAATTCACCGTCTCTTAGTTCTCTGCCAGTTAATCAAATAAGCCCTCCTATTCCTAGCATCGCTGAACCCCCCATTGCAGAACGTTCTCGTCAGGTGCCTAATGTGACGGCATCAGCTTCAACAGGGGTTGCTTCCGTGACTATTAAACCAAATGGCGTGTCTGCTGTTAAGGACTCGTCGTTGACTAATTCTAGTGTTTGCAGTGTCCAAAATACCGAGGCTCGTAGTTCAGCATCTTGTGATGCCAGTTCCCCTTTACCCCAAAAAGGGAATGAAGCTTTCTCAGAAATCTCTACGCAACAGTCTAAATCTTCTGAGGAAATTTTGCCAAAACAATCTGCTGAATCTGTTGTTGTCACTGCTGATAAGGTTACAGTGCTACCTACGTCAGCTGTGACCGAGGATTCTGTTTCTGTTGTGACAAATAATGAAGCCAGCACGAGGGAACCCATTAGTCGGTCCAACTCTTTGAAGGATAACCAGAAGAAACCTGGGAAAAAAGGCCAATCATCTAAAGATCAGGTTTCTTTGCAATCTCCTACTGTGGCTATTATGCCGTCTCGAGCTGTTGACAGTGATATATCTGAATCTGGGGTTTCCACACCTGTAGGAAGTGAAACAGACCATTCTCCTTCAGTTATTGCTCAAGTGGCTGATAGTTTGAGTAATCATAAGCATGATCTGATAGATGAATCTTCCGAAGATCTTCAGTCTGCTGATTTACCAGAAACAACAGCAAAGGAAATCAATGATAGTGCAGAGAATGCATGCAGCGACTCAATGTCAGTTTCAGGTACCAAGGATACACCAAATTTAGAACCAAATAAGGTGAAAACTACATCTAAAGGGAAGAAGAAACTAAAAGTGATTCTCCAGAAAGCAGATGCTGCCGGGTCAACTTCTGATCTTTATAATGCATACAAAGGACCTGAGGAAAAGAAAGAAACTGTTTCAATTTCAGAGAGCATAGAAAGTGAATCTACATCTGAAGGGTTAAAGCAGTTATCTGCAGATTCTGCTCAGTTAGATGCTACCGTAAGGGAGAAATGTGGTCACTCTAAAGTTGAACCTGATGACTGGGAGGATGCAGCTGACATGTCTACAAAAATTGAAGTTGATGATAAATCTCAACAGGTTATTGATGGAAGTGGAAGTACAGCAAAAAAGTATTCACGTGATTTTCTTTTGAAATTCGCAGAGCAATGCATTAGTCTTCCTGAAGGTTTTGAAATTACGGCAGACATAGCTGATGTTTTGGTTAGTGCTAATATTAGTAACTCTCGTGATTCACATCCTAGTCCTGGAAGAACTGGAGACAGGTCAAGGATGGAACGCCGTGGTAATGTTGTGGCTGAGGAAGACAGATGGAATAAAGGTTCTAATTCTTTTCATTCTGGGCGTGGTATGGATGTCACTGGTAGTAATGGTGGACCTCGACATGGCCAAGGAGGAGGTAGTTATGGTGTTTTAAGAAATCCTCGTGGACCGGCACCCCTCCAATATACCGGGGGAATCCTTGGTGGGCCAATGCAAACTGTGGGAAATCAGGGTGGAATGCAAAGAAGTAGCCCTGATGGGGAGAGGTGGCAGCGTTCTCCTAGCTTCCAGCAGAGGGGCTTAATTCCTTCTCCCCAGTCTCCCTTACAGATGATGCACAGGGCCGAGAAGAAGTATGAAGTAGGTAAAGTCTCGGATGCGGAAGAGGCAAAGCAGAGGCAACTGAAGGCTATCTTGAACAAACTAACTCCTCAGAATTTCGATAGACTTTTTGAACAAGTAAAAGCAGTTAATATTGACAATGCAGTCACTCTCACTGGTGTCATCTCACAAATCTTCGAGAAGGCTCTGATGGAACCTACCTTCTGTGAAATGTATGCCAACTTCTGCTCACATCTGGCTTCTGAATTACCCGATTTGAGTGAGGACAATGAAAAGATAACTTTTAAAAGGTTATTATTAAATAAATGCCAGGAGGAATTTGAGAGGGGTGAAAGAGAACAAGAAGAGGCAAATAAGGTTGACGAGGGAGAGGTCAAGCTGTCAAATGAAGAAAGGGAGCAAAGAAGAACAAAGGCAAGAAGACGCATGTTAGGAAATATCAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACAGAAAGGATAATGCACGAGTGTATCAAAAAGTTACTTGGTCAGTGTCAGGATCCTGATGAGGAAGATGTTGAAGCTTTGTGCAAGCTGATGAGTACTATTGGGGAGATGATTGACCATCCCAAAGCCAAGGAACATATGGATGTATATTTTGAAAGGTTGAAAATCTTATCAAACAACATGAATTTATCTTCTAGGGTGAGGTTTATGTTGAAGGATGTAATTGATTTGAGAAGGAATAGGTGGCAACAAAGGAGGAAAGTTGATGGTCCAAAGAAGATTGAAGAAGTGCACAGAGATGCTGTGCAAGAGAGGCAGGCTCAAGCTCAAGCTGGTAGGATGGGTCGTGGTATGGGTAACAATCAATCTGCAAGAAGGAACCCTATGGATTTTGGTCCTAGAGGATCATCTATGTTGTCTCCGCCTTCTCAGATGGGTGGACCGCGTGGGATGTCTTCTCCAGCCCGTGGATATGGTGTTTTACAAGATGCTCGTTTTGAAGAAAGGCAATCTTACGAGCCTCGGACTTTGTCAGTTAATTTACCTCAAAGACCGTTGGGTAATGATTCTATAACATTGGGACCCCAAGGTGGTCTTGCTAGGGGAATGTCCATCAGAGGATCAACAACAAATTCAAATATCTCAACACCAGATGTGCATTCTGGCCCTGGAGACTCTCACAGAATGCAGAGCGGTATTAATGGTTATAACAATTCATCTGAGCGCATGCCGCATGGCTCAAGGGAGGATCCTGCATCAAGATATATTTCAGACAGATCTTCAAGTCTAGCTGGATATGATCATTCAAATGCTCCAGACCATAATATAAACTATGGTAACAGAGACTTGAGGAATGATGATCGGAATCTTGGCAGACCTGTTGCAACTTCACCTCACCCTCAGTTGCAGGGGCCAGTTGTCTCCCAAAATGCTTCCTCAGAGAAGGTTTGGTCAGAGGAACGACTACGGGACATGTCCTTGTCAGCAATCAGAGAGTACTACAGTGCTAGAGATGTAAATGAGGTTGCTCAATGTATCAAAGATTTGAACTCTCCAAACTTTCATCCTTCCATGGTTTCTATCTGGGTGATAGACTCGTTTGAGAGAAAGAACACTGAAAGAGATCTTTTGGCCAAACTGCTTGTCAAACTTGGAAAATCTCAGGATGGCCTTTTGACTCAAACTCAGTTTATTGAAGGGTTCGAGATGGTTCTCAGTAATTTGGAGGATGATGTTAATGATGCCCCCAAGGCGCCAGAGTTTCTTGGCAATATTTTTGCAGAACTTATAACAGAGAGTTTAGTCGGTTTGAATGAGATTGGGCAGTTAATACACGATGGTGGAGTGGAGCCAGGCAGTCTCTTAAAATTTGGACTTGCAGCTGATGTTCTTGGAAGCACATTGGAGGCTATAAAACATGAGAAAGGGGACGTCGTTCTAAACGAGATCCAGACAAGCTCAAATTTGAAGTTGGAGTCTTTCCGACCACCTAATGATTCTAGTACATCAAGGAAGTTGGAGAAATTTATTTAG 5094 0.4425 MSFNQSKTEKNDAAYRKSGRSSSFNQQRGPSAAYGRGSGGPAPSNNSANPLSSNRSFNKKSNNAQGGQYRVNPSQVNSTESNSASAARTLHNGTHVQPHLHGASDGPVAKASESTVAQRSPRVVPNPTSQPPPVSSDKTAPTGPAKGDASKAFPFQFGSIVPGFMNGVAIPARTSSAPPNLDEQKRDQAHHDSVRSVPSVPIPPVPKQQQQQQQPPRNDSGVTEKSNARETNLGTKAKKDPQVPAMIPASQMLKPSVVPAPGISMSTPFQQSHASLQFGGPNPQIQSQGMSSTPLHLPIPMPIPMGNVAQVQPPVFVPGLQPHPMHPHGIMHSGHNLNFAHQMGHQMPHQMSNMGIGISPQYPQHQAGKYTRKTTTVKITHPETHEELRLDKRAGGYSDGGSSGARSHPNVPSQSQPVKSVAVSQPTNYHPYSSSPPYYQPSSSLPLTSSQITPNAQPPIFNYPVHNGPQNVAFVNSPSLSSLPVNQISPPIPSIAEPPIAERSRQVPNVTASASTGVASVTIKPNGVSAVKDSSLTNSSVCSVQNTEARSSASCDASSPLPQKGNEAFSEISTQQSKSSEEILPKQSAESVVVTADKVTVLPTSAVTEDSVSVVTNNEASTREPISRSNSLKDNQKKPGKKGQSSKDQVSLQSPTVAIMPSRAVDSDISESGVSTPVGSETDHSPSVIAQVADSLSNHKHDLIDESSEDLQSADLPETTAKEINDSAENACSDSMSVSGTKDTPNLEPNKVKTTSKGKKKLKVILQKADAAGSTSDLYNAYKGPEEKKETVSISESIESESTSEGLKQLSADSAQLDATVREKCGHSKVEPDDWEDAADMSTKIEVDDKSQQVIDGSGSTAKKYSRDFLLKFAEQCISLPEGFEITADIADVLVSANISNSRDSHPSPGRTGDRSRMERRGNVVAEEDRWNKGSNSFHSGRGMDVTGSNGGPRHGQGGGSYGVLRNPRGPAPLQYTGGILGGPMQTVGNQGGMQRSSPDGERWQRSPSFQQRGLIPSPQSPLQMMHRAEKKYEVGKVSDAEEAKQRQLKAILNKLTPQNFDRLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCSHLASELPDLSEDNEKITFKRLLLNKCQEEFERGEREQEEANKVDEGEVKLSNEEREQRRTKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQCQDPDEEDVEALCKLMSTIGEMIDHPKAKEHMDVYFERLKILSNNMNLSSRVRFMLKDVIDLRRNRWQQRRKVDGPKKIEEVHRDAVQERQAQAQAGRMGRGMGNNQSARRNPMDFGPRGSSMLSPPSQMGGPRGMSSPARGYGVLQDARFEERQSYEPRTLSVNLPQRPLGNDSITLGPQGGLARGMSIRGSTTNSNISTPDVHSGPGDSHRMQSGINGYNNSSERMPHGSREDPASRYISDRSSSLAGYDHSNAPDHNINYGNRDLRNDDRNLGRPVATSPHPQLQGPVVSQNASSEKVWSEERLRDMSLSAIREYYSARDVNEVAQCIKDLNSPNFHPSMVSIWVIDSFERKNTERDLLAKLLVKLGKSQDGLLTQTQFIEGFEMVLSNLEDDVNDAPKAPEFLGNIFAELITESLVGLNEIGQLIHDGGVEPGSLLKFGLAADVLGSTLEAIKHEKGDVVLNEIQTSSNLKLESFRPPNDSSTSRKLEKFI* 1698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5116 1697 MobiDBLite consensus disorder prediction 1138 1164 - -
Psa4g5116 1697 SMART if4_15 1046 1268 IPR003890 GO:0003723|GO:0005515
Psa4g5116 1697 MobiDBLite consensus disorder prediction 901 942 - -
Psa4g5116 1697 SUPERFAMILY ARM repeat 1504 1695 IPR016024 -
Psa4g5116 1697 MobiDBLite consensus disorder prediction 376 394 - -
Psa4g5116 1697 MobiDBLite consensus disorder prediction 1 151 - -
Psa4g5116 1697 MobiDBLite consensus disorder prediction 1488 1502 - -
Psa4g5116 1697 Pfam MA3 domain 1514 1619 IPR003891 -
Psa4g5116 1697 MobiDBLite consensus disorder prediction 403 426 - -
Psa4g5116 1697 MobiDBLite consensus disorder prediction 785 808 - -
Psa4g5116 1697 MobiDBLite consensus disorder prediction 908 935 - -
Psa4g5116 1697 ProSiteProfiles MI domain profile. 1508 1632 IPR003891 -
Psa4g5116 1697 MobiDBLite consensus disorder prediction 1356 1376 - -
Psa4g5116 1697 MobiDBLite consensus disorder prediction 630 644 - -
Psa4g5116 1697 Coils Coil 1128 1148 - -
Psa4g5116 1697 MobiDBLite consensus disorder prediction 570 586 - -
Psa4g5116 1697 Gene3D - 1500 1697 - -
Psa4g5116 1697 MobiDBLite consensus disorder prediction 40 92 - -
Psa4g5116 1697 MobiDBLite consensus disorder prediction 1290 1313 - -
Psa4g5116 1697 MobiDBLite consensus disorder prediction 1395 1465 - -
Psa4g5116 1697 SMART ma3_7 1509 1623 IPR003891 -
Psa4g5116 1697 MobiDBLite consensus disorder prediction 645 660 - -
Psa4g5116 1697 MobiDBLite consensus disorder prediction 570 590 - -
Psa4g5116 1697 MobiDBLite consensus disorder prediction 17 32 - -
Psa4g5116 1697 MobiDBLite consensus disorder prediction 1443 1463 - -
Psa4g5116 1697 MobiDBLite consensus disorder prediction 1360 1376 - -
Psa4g5116 1697 MobiDBLite consensus disorder prediction 1414 1429 - -
Psa4g5116 1697 MobiDBLite consensus disorder prediction 211 230 - -
Psa4g5116 1697 MobiDBLite consensus disorder prediction 668 684 - -
Psa4g5116 1697 MobiDBLite consensus disorder prediction 991 1010 - -
Psa4g5116 1697 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 128 1686 - -
Psa4g5116 1697 MobiDBLite consensus disorder prediction 365 426 - -
Psa4g5116 1697 MobiDBLite consensus disorder prediction 177 244 - -
Psa4g5116 1697 MobiDBLite consensus disorder prediction 1483 1502 - -
Psa4g5116 1697 Pfam MIF4G domain 1046 1267 IPR003890 GO:0003723|GO:0005515
Psa4g5116 1697 MobiDBLite consensus disorder prediction 609 684 - -
Psa4g5116 1697 SUPERFAMILY ARM repeat 1040 1270 IPR016024 -
Psa4g5116 1697 Gene3D - 1046 1281 - -
Psa4g5116 1697 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 128 1686 IPR045208 GO:0003743
Psa4g5116 1697 MobiDBLite consensus disorder prediction 609 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5116 Psa-Chr4 442391275 442400539 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5116 1 1696 Eukaryotic Initiation Factors Gene Family AT3G60240 44.992 0.0 1204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5116 K03260 - gmx:100798562 2078.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g5116 4 442391275 442400539 Psa4g5116 4 442391275 442400539 ECH