Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5114 ATGAAGTGCTTTTACTATTTTAAATTTATACACAAGGGTAGGGGACAAAGATCAGCACCTGAGCTAAAAGAGCAAGAGAAAAGCCAATTTTCAGGATCTGAAAGAGTTACAAAGTCTTCTTGTTCATCTACTTCTTCACCTAGGGGTATACCGAAACTCTATGAGGAGAAGGGTCATAATTTGAGGGTGTTTTCTTTCTCAGAGCTTAAACGTGCAACAAGTGATTTCAATAGGCTTCTTAAGATAGGTGAAGGTGGATTTGGAAGTGTTTTTAAAGGTTCAATTAAGCCTGTTGATGGAAATGGTGAGAATCTCTTAGTTGCCATCAAAAGACTTAACAAAGATGCATTGCAGGGTCATAAGCAATGGTTGACAGAAGTTCAATTTCTCGGTGTTGTGGAGCATCCAAACCTTGTGAAGCTTATTGGTTACTGTGCTTTGGATGGTGAGAGAGGGATTCAAAGATTACTCGTGTACGAATACATGCCGAATCGAAGCTTAGAAGCTCATCTTTTCAATAAAGCTTATGATCCTGTGCCTTGGAAGACAAGACTTGAAATTGCACTTGGAGCAGCTCAAGGCTTATCTTATCTCCATGAAGAAATAGAAGTCCAGGTGATATATCGCGATTTTAAATGCTCAAACGTGCTACTGGATGAAAATTTTAAACCGAAACTTTCTGATTTCGGACTCGCTAGGGAGGGACCGGTAGCAGGGGATACTCATGTTTCAACTGCTGTAATGGGGACACATGGTTATGCTGCTCCGGATTACATTGAGACAGGCCATCTCACTTCCAAGAGTGACGTGTGGAGTTTCGGTGTCGTGCTATACGAAATACTCACCGGTAGGCGTTCGTTGGCAAGAAACCGGCCGAAAACTGAACAAAAACTATTGGAATGGGTGAAGAACTATCCACCTGATAGCAAAAAGTTTGACGCAATAATGGATCCAAGACTTGAGGGACAATATTCAATCAACGCAGCGAGACAAATCGCTAAGCTCGCCGATCATTGTCTGCGTAAGAGCGCGAAAGATAGGCCGGCAATGAGTCAGGTGGTAGAGAGATTAAAGCAAATAATACAAGACTCCGATGAAGAACAAGAACAAGAACAAGAACAAGAACAAGATGAACACGAGACTAATGAGATAAACATCGTTGAGGTAGCTGAAAATGAATCGGTTGAGCCGCCTCTAGAAGAGGCGAATTCGTCGGGATCGACCGAGTTATGGAGAAAGAGAATGGAACATCTTGCAAAACTTGGTGAGCATGTGGAGAGTGCTAGTAGAAAAAGGTTTATGATCCAACAGAGAACTAATGTGTCTTCTTAG 1332 0.4197 MKCFYYFKFIHKGRGQRSAPELKEQEKSQFSGSERVTKSSCSSTSSPRGIPKLYEEKGHNLRVFSFSELKRATSDFNRLLKIGEGGFGSVFKGSIKPVDGNGENLLVAIKRLNKDALQGHKQWLTEVQFLGVVEHPNLVKLIGYCALDGERGIQRLLVYEYMPNRSLEAHLFNKAYDPVPWKTRLEIALGAAQGLSYLHEEIEVQVIYRDFKCSNVLLDENFKPKLSDFGLAREGPVAGDTHVSTAVMGTHGYAAPDYIETGHLTSKSDVWSFGVVLYEILTGRRSLARNRPKTEQKLLEWVKNYPPDSKKFDAIMDPRLEGQYSINAARQIAKLADHCLRKSAKDRPAMSQVVERLKQIIQDSDEEQEQEQEQEQDEHETNEINIVEVAENESVEPPLEEANSSGSTELWRKRMEHLAKLGEHVESASRKRFMIQQRTNVSS* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5114 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Psa4g5114 443 Coils Coil 354 377 - -
Psa4g5114 443 MobiDBLite consensus disorder prediction 363 411 - -
Psa4g5114 443 MobiDBLite consensus disorder prediction 32 49 - -
Psa4g5114 443 PANTHER OS01G0588500 PROTEIN-RELATED 23 431 - -
Psa4g5114 443 MobiDBLite consensus disorder prediction 17 31 - -
Psa4g5114 443 SUPERFAMILY Protein kinase-like (PK-like) 59 357 IPR011009 -
Psa4g5114 443 ProSitePatterns Protein kinases ATP-binding region signature. 82 110 IPR017441 GO:0005524
Psa4g5114 443 Gene3D Transferase(Phosphotransferase) domain 1 162 387 - -
Psa4g5114 443 MobiDBLite consensus disorder prediction 17 49 - -
Psa4g5114 443 CDD STKc_IRAK 82 360 - -
Psa4g5114 443 ProSiteProfiles Protein kinase domain profile. 76 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g5114 443 Gene3D Phosphorylase Kinase; domain 1 51 161 - -
Psa4g5114 443 Pfam Protein tyrosine and serine/threonine kinase 81 357 IPR001245 GO:0004672|GO:0006468
Psa4g5114 443 PANTHER OS07G0495150 PROTEIN 23 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5114 Psa-Chr4 442305132 442307927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5114 62 357 Glycoside Hydrolase AT3G07070 50.000 3.69e-94 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Psa4g5114 PK_Tyr_Ser-Thr 8.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5114 - - cam:101511022 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g5114 4 442305132 442307927 Psa4g5114 4 442305132 442307927 ECH