Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5110 ATGTTCCGCCGCGCTACATCCACTTTCCTATCTCGCGCCTCCGCCACTCGCCGCTTCTCCACCGATGTGGCTACTCCCGCCACCAATTCCAGCTTCGTTGAAGCGTGGAGGAAAGTTAGCCCCAATATCGATCCACCTAAGACGCCACTCGAATTCCTCAAAACTCGCCCACCAGTTCCTTCTACTATCCCTACCAAACTCACCGTCAATTTCGTTCTTCCTTATTCTTCTCAATTGGCCGCTAAAGAGGTTGATAGTGTTATAATCCCAGCTACAACCGGTGAGATGGGTGTTCTCCCAGGACACGTCGCAACAATCGCAGAGTTGAAACCTGGGGTCCTTACGGTACAAGAAGGCACTGATACAACTAAGTATTTTGTAAGCAGTGGCTTCGCATTCATCCACGCAAACTCTGTTGCTGATATTATTGCTGTAGAGGCTGTACCAGTGAATCAACTTGATGCAGACTTGGTCCAGAAGGGTCTTCAAGAGTTCACTCAGAAACTCAACTCAGCAACAACGGACTTGGAGAAAGCTGAAGCTCAGATTGGAATTGATGTGCATAGCGCTCTCAACTCAGCTCTCACAGGCTAA 594 0.4899 MFRRATSTFLSRASATRRFSTDVATPATNSSFVEAWRKVSPNIDPPKTPLEFLKTRPPVPSTIPTKLTVNFVLPYSSQLAAKEVDSVIIPATTGEMGVLPGHVATIAELKPGVLTVQEGTDTTKYFVSSGFAFIHANSVADIIAVEAVPVNQLDADLVQKGLQEFTQKLNSATTDLEKAEAQIGIDVHSALNSALTG* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5110 197 Gene3D - 57 153 IPR036771 -
Psa4g5110 197 CDD F1-ATPase_delta 67 190 IPR001469 GO:0015986|GO:0045261|GO:0046933
Psa4g5110 197 Coils Coil 162 182 - -
Psa4g5110 197 PANTHER ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL 1 197 - -
Psa4g5110 197 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 67 148 IPR036771 -
Psa4g5110 197 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 1 197 IPR001469 GO:0015986|GO:0045261|GO:0046933
Psa4g5110 197 Hamap ATP synthase epsilon chain [atpC]. 65 185 IPR001469 GO:0015986|GO:0045261|GO:0046933
Psa4g5110 197 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 67 139 IPR020546 GO:0015986
Psa4g5110 197 Gene3D - 154 196 - -
Psa4g5110 197 TIGRFAM ATP_synt_epsi: ATP synthase F1, epsilon subunit 78 185 IPR001469 GO:0015986|GO:0045261|GO:0046933
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5110 1 197 Primary Pumps ATPases AT5G47030 67.961 6.24e-98 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5110 K02134 - gmx:100780778 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g5110 4 442126084 442129493 Psa4g5110 4 442126084 442129493 ECH