Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5107 ATGGTCAAAATAATGGGCTTGCTTCAAAGTCTTCATCTATCACTTGCTAGTAGTAGCATATTGCCATTTGGAACTTCCACTCTTAAAGTTACAATCATTGCTCAGATGAATGATAAATATTGCATGAACGTGACTGATCTAGTTAAAAATCTGAGGCATGATCTTTCCGAATTACGTGACAACCAGAATAATATTTCTGAGAGGACTACGTAG 213 0.3615 MVKIMGLLQSLHLSLASSSILPFGTSTLKVTIIAQMNDKYCMNVTDLVKNLRHDLSELRDNQNNISERTT* 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5107 70 PANTHER BHLH TRANSCRIPTION FACTOR 1 59 - -
Psa4g5107 70 Coils Coil 41 68 - -
Psa4g5107 70 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5107 Psa-Chr4 442040544 442040833 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5107 1 58 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 46.552 2.10e-11 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5107 - - mtr:MTR_8g009020 89.3521