Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5100 ATGACTTCATCTACTTATAAATTTTACACCATCTTCATTTCCATTTTTCTTGTCCTTCTCTTTATTTCCACATGTGGTATAGCGTTGGAAGAAAAATTTTGTGGAAGGAAGAGTAAAACATGGAGATCAATCTGCTTTCTTAACATGCCTTGTACTTTGGAGTGCAATCGCTCGGAGCAAGCAATTTTTGGTGTTTGTGAACACTATGATTGCTTCTGCTTCTTCAATTGTTCTGAATTAAGCTTTTGA 249 0.3534 MTSSTYKFYTIFISIFLVLLFISTCGIALEEKFCGRKSKTWRSICFLNMPCTLECNRSEQAIFGVCEHYDCFCFFNCSELSF* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5100 82 Pfam Gamma-thionin family 33 77 - -
Psa4g5100 82 Gene3D - 32 77 IPR036574 -
Psa4g5100 82 PANTHER DEFENSIN-LIKE PROTEIN 1 1 77 - -
Psa4g5100 82 PANTHER DEFENSIN-LIKE PROTEIN 18-RELATED 1 77 - -
Psa4g5100 82 SUPERFAMILY Scorpion toxin-like 32 77 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5100 Psa-Chr4 441755356 441757529 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5100 1 77 Plant Defensins Gene Families AT1G19610 38.272 4.51e-10 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5100 - K08212 ini:109162567 55.4546