Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5089 ATGAAAGAGTTAGTAACTTCAAACGAATCACCGTTCCTTAACCTCTCTATGGATGAGATACTGGAATTGGAAAGAGCTTATAATGGTGCTAGAGATAAATCACTTGATCAGAGTTTCTGCAAGGAGATTGCTACAAGTTTGAGTTCCTTATCAAATAAAAAATCCTTATCATGGGAACAGGTGCAGCAGTGGTTTCATAATAAACATAGAGAGTCTACGGGTCTAGTTGCTTCATCACATGAGGGGCTGAATCTTTACGTTGATCTTTCGGATGAATCTTCTTCAAGAAAGGAACATAAGATCTCTCCGAATCCAAAAGGTATTAAAGCAGAAGATCTGTCAGAATTGGGTTTTGAATCAATATCTATAAAAGACAAAGCATGGCATGATGTTGCAATGTTTCTAAACTATAGAGTTTTAAGCACAGGCGAACTTGAAGCTCGTGTACGATATCATGGATTCGGTAAGGAGGAAGATGAATGGGTTAATGTGAAAGATGGGGTGCGAGAGAGATCCATCCCACTGGAAGCTTCCGAGTGTCACAAGTTGAAGGAAGGACATCTTGTACTATGTTTCCTGGTAAAATCTGATTATGCCCTCTACTGTGATGCCCGAGTTTTGAAAGTCGAGAGGAGGGTACATGATAGCAAAGAGTGTACCTGCACCTTCACTGTCCGGTTTTACCATGACATGTCTGAGGAAGACGTTCGTTGGGACAGTTTGTGCTGTAGACCGACACAAGAAGAAGCTGAGGTCCCCTTAGAACCTTTCATGAATCCCATAGCGACTTTGTGGGGATGA 801 0.4157 MKELVTSNESPFLNLSMDEILELERAYNGARDKSLDQSFCKEIATSLSSLSNKKSLSWEQVQQWFHNKHRESTGLVASSHEGLNLYVDLSDESSSRKEHKISPNPKGIKAEDLSELGFESISIKDKAWHDVAMFLNYRVLSTGELEARVRYHGFGKEEDEWVNVKDGVRERSIPLEASECHKLKEGHLVLCFLVKSDYALYCDARVLKVERRVHDSKECTCTFTVRFYHDMSEEDVRWDSLCCRPTQEEAEVPLEPFMNPIATLWG* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5089 266 Pfam SAWADEE domain 115 242 IPR032001 GO:0003682
Psa4g5089 266 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 1 8 248 - -
Psa4g5089 266 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 8 248 IPR039276 -
Psa4g5089 266 Gene3D - 175 247 - -
Psa4g5089 266 Gene3D - 113 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5089 Psa-Chr4 441119620 441126717 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Psa4g5089 SAWADEE 1.4e-35 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5089 - - gmx:100799110 293.508