Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5083 ATGTTCAAATTCCTCAAAGACGTTGTTGGTGGATCTGGAACTGGCATCAAAGATCTCCCTTACAACATCGGTGAACCTTATCATTCCGCTTGGGGTTCTTGGATTCATCACCGCGGCACTTCAAAGGATGACGGTTCTCCGGTTTCGATTTTTACTTTATCTGGAAGTAATGCTCAGGATGGACATTTAGCTGCGGGCCGTAATGGTGTCAAGCGTCTACGAACTGTTAGGCATCCAAATATTTTGTCATTTCTTCATAGTACCGAGATCGAAACTTTTGATGGCGGTTCTTCTAAGGTCACAATATATATTGTGACCGAACCTGTAATGCCACTTTCAGATAAGGTTAAAGAGTTAGGACTTGAGAGTACACAAAGGGATGAATATTATGCTTGGGGACTGCTTCAGATATCGAAAGCCGTGAGCTTCTTAAATAATGATTGTAAACTTGTTCATGGCAATGTTTGCTTGGCTAGTGTTGTTGTCACACAAACTCTGGACTGGAAACTCCATGCTTTTGATGTTCTATCAGAGTTTGATGGGAGCAATGAGACATCCTCTACGCAAATGCTGCAATATGCATGGCTTGTTGCAACTCAATACAAAGCAATGGAGCTGGCAAAATCTGACTGGGCTGTAATTAAGAAGTCTCCTCCATGGGCCATTGATTCTTGGGGCATGGGCTGTCTTATCTATGAGCTATTCTCTGGTTTGAAGTTGAGCAAAACAGAAGAGTTACGTAACACTGCCTCCATTCCCAAGTCCCTGCTTCCAGATTACCAGCGGCTACTGAGTTCCACACCTTCTCGTAGATTGAATACTTCAAAGCTTATAGAAAACAGTGAGTATTTTCAGAATAAGTTGGTAGACACAATACATTTCATGGAAATTCTCAGTTTGAAAGATAGTGTTGAGAAGGACACCTTCTTCCGCAAACTTCCAAATTTAGCAGAGCAGCTTCCTCGTCAGATTGTGTTAAAGAAGTTACTTCCTTTATTAGCTTCTGCCCTTGAATTTGGTTCAGCTGCTGCCCCTGCTCTGACTGCATTGTTGAAAATGGGTTCGTGGCTTTCAGCCGAGGAGTTTCGTGTCAAGATTCTTCCAACAATAATTAAACTCTTTGCCTCCAACGATCGAGCTGTCCGTGTTAGCCTTCTCCAACATATTGAACAATTTGGAGAGTCATTATCAGCTCAAGCTGTTGATGAGCAGGTTTACCCTCACGTTGCTACTGGTTTCTCTGATACATCTGCTTTTTTGAGGGAACTTACTCTCAAGTCCATGTTAGTTCTGGCTCCGAAACTGTCTCAAAGGACCTTGTCTGGGTCATTATTAAAGCATCTGTCGAAGTTACAGGTTGATGAAGAGGCAGCGATACGAACAAATACTACTATCTTGCTAGGAAATATTGCAAGTTACTTAAATGAAGGGACAAGAAAAAGAGTGTTGATTAATGCATTTACAGTCCGTGCTTTACGTGATACCTTTCCACCTGCTAGAGGAGCAGGAATTATGGCTTTATGTGCCACCAGTTCTAACTATGACATCACTGAAATTGCCACTCGGATTCTTCCTAATGTTATTGTCCTCACAATTGATCCTGACAGTGATGTTCGATCTAAGGCATTTCAAGCTATTGATCAATTTTTGCTGATGGCAAAGCAACATTATGAAAAGACAAACATAGCAGAGGCTACTGGGGGTGCAGGCACGGGAAGCTCATCAATTCCAGGAAATGCAAGTTTACTTGGATGGGCCATGAGCTCCTTGACCCTGAAGGGAAAACATTCTGATCATGCTCCAGTTGCTTCTGTTAGTCCTAGTGCCCTTACATCAACATCTTCTAATGCCACCTCAGCTGTAGATACTCCTTCAACAGCACCCATCCGTGTAAGTTCCACACCAGATTTCACTGAGCACCATGCCCCTCCATCTCCTACATCAACGGATGGCTGGGGGGAACTAGAGAATGGAATCGATGAGGAACCTGAAAATGACAAGGATGGGTGGGATGACCTAGAACCACTTGAAGATACAAAGCCAGCTCCAGCACTTATCAACATTCAAGCAGCTCAAAGGCGGCCGGTTTCTCAACCAGTTTCACAGACAAAAGCTTCAGGTATACGACCCAAAAGTACATCAAAGTTGAGCAAGGATGAAGATGATGATCTTTGGGGTGCCATAGCAGCTCCTGCTCCAAAAACATCAAAACCTTTAAATTTGAAATCAGCTGCAACTGATGATGATGATCCCTGGGCTGCCATTGCGGCTCCTGCGCCCACTACAAGGGCCAAGCCTTTATCATCTGGCAGAGGCCGGGGAGCCAAACCTGCTGCTCCAAAATTAGGTGCTCAGCGGATAAACCGGACATCATCGTCCGGGATGTAA 2388 0.4397 MFKFLKDVVGGSGTGIKDLPYNIGEPYHSAWGSWIHHRGTSKDDGSPVSIFTLSGSNAQDGHLAAGRNGVKRLRTVRHPNILSFLHSTEIETFDGGSSKVTIYIVTEPVMPLSDKVKELGLESTQRDEYYAWGLLQISKAVSFLNNDCKLVHGNVCLASVVVTQTLDWKLHAFDVLSEFDGSNETSSTQMLQYAWLVATQYKAMELAKSDWAVIKKSPPWAIDSWGMGCLIYELFSGLKLSKTEELRNTASIPKSLLPDYQRLLSSTPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSAEEFRVKILPTIIKLFASNDRAVRVSLLQHIEQFGESLSAQAVDEQVYPHVATGFSDTSAFLRELTLKSMLVLAPKLSQRTLSGSLLKHLSKLQVDEEAAIRTNTTILLGNIASYLNEGTRKRVLINAFTVRALRDTFPPARGAGIMALCATSSNYDITEIATRILPNVIVLTIDPDSDVRSKAFQAIDQFLLMAKQHYEKTNIAEATGGAGTGSSSIPGNASLLGWAMSSLTLKGKHSDHAPVASVSPSALTSTSSNATSAVDTPSTAPIRVSSTPDFTEHHAPPSPTSTDGWGELENGIDEEPENDKDGWDDLEPLEDTKPAPALINIQAAQRRPVSQPVSQTKASGIRPKSTSKLSKDEDDDLWGAIAAPAPKTSKPLNLKSAATDDDDPWAAIAAPAPTTRAKPLSSGRGRGAKPAAPKLGAQRINRTSSSGM* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5083 795 MobiDBLite consensus disorder prediction 604 628 - -
Psa4g5083 795 MobiDBLite consensus disorder prediction 691 712 - -
Psa4g5083 795 SUPERFAMILY Protein kinase-like (PK-like) 37 287 IPR011009 -
Psa4g5083 795 SMART serkin_6 37 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g5083 795 MobiDBLite consensus disorder prediction 689 795 - -
Psa4g5083 795 MobiDBLite consensus disorder prediction 603 628 - -
Psa4g5083 795 Gene3D Transferase(Phosphotransferase) domain 1 109 279 - -
Psa4g5083 795 Pfam Protein tyrosine and serine/threonine kinase 46 237 IPR001245 GO:0004672|GO:0006468
Psa4g5083 795 MobiDBLite consensus disorder prediction 633 652 - -
Psa4g5083 795 SUPERFAMILY ARM repeat 293 551 IPR016024 -
Psa4g5083 795 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 1 792 - -
Psa4g5083 795 ProSiteProfiles HEAT repeat profile. 366 404 IPR021133 -
Psa4g5083 795 ProSiteProfiles Protein kinase domain profile. 2 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g5083 795 Gene3D - 282 560 IPR011989 -
Psa4g5083 795 Gene3D Phosphorylase Kinase; domain 1 12 107 - -
Psa4g5083 795 PANTHER - 1 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5083 Psa-Chr4 440901956 440916741 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5083 70 291 MAP Kinase Kinase Kinase AT5G66850 24.359 4.80e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL1 Psa4g5083 PK_Tyr_Ser-Thr 2.5e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5083 K08876 - gmx:100792884 1324.3