Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5039 ATGGATATCTGGAAAATTATTGGTGCGCGTTGGTATATTAAAGGATATGAAGTAGAATTCGATTATGGTTCCAGTCCCACAACTATTGGTTTAGAGAAAGCTGCAATAAAGAAGATGGACATGAAAGCATCAAAAGAATTTTTTGCCGAGCTTAAGGTGTTAACGCGTGTTCATCACTTGAACTTGGTAAGGTTGATTGGATATTGCATTGAAGGTTGA 219 0.3699 MDIWKIIGARWYIKGYEVEFDYGSSPTTIGLEKAAIKKMDMKASKEFFAELKVLTRVHHLNLVRLIGYCIEG* 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5039 72 Gene3D Phosphorylase Kinase; domain 1 3 72 - -
Psa4g5039 72 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1 31 72 - -
Psa4g5039 72 SUPERFAMILY Protein kinase-like (PK-like) 33 71 IPR011009 -
Psa4g5039 72 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 31 72 IPR044812 GO:0019199|GO:0045087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5039 Psa-Chr4 438161603 438163874 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5039 32 72 Receptor kinase-like Gene Family AT3G21630 87.805 1.58e-20 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Psa4g5039 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5039 - K13429 palz:118031955 80.4925