Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5025 ATGGATTTGGTAGGACCCGCCATGAACCGGTTGGTCGGAGATTACATACTGGGTCCTCGAATCGGGTCGGGTTCATTTGCGGTGGTGTGGCGTTCGCGGCATAGAATTTCAGGTTTGGAGGTAGCGATTAAGGAGATTGATCAGACTCAATTGAGCCCTAAAGTTAGGGATAATCTCATCAAAGAGATTACTATTCTTAGAACTATTCATCACCCTAACATCATTCGACTTTTTGAAGCTATAGAGACCAATGACAGGATTTACCTAGTTTTGGAGTATTGTGGTGGAGGGGACCTTGCTGCCTACATACATCGCTATGGGAGAGTTTCAGAATCCATTGCTCGACATTTCATGAGGCAATTGGCTGCTGGGTTGCAAGTGCTTCAAGAAAAGAACCTCATACATAGAGATTTAAAACCACAGAACTTACTGTTGGAAACTACTTCAGCTACACCACTTATGAAAATCGGTGATTTTGGTTTTGCAAGGTCTCTCACACCGCTGCAGTTGGCAGATACACTATGTGGTTCACCTTATTACATGGCTCCCGAGATAATTCAGAGTCAGAAATACGATGCCAAGGCTGATTTATGGAGTGTCGGAGCAATATTGTATCAGCTAGTGGTCGGGAAACCGCCGTTTGATGGAAATAGTCAATTGCAGCTTTTTCAAAATATTTTGGCATCTACCGAACTGCACTTTCCATCAAAGATTTTAAAAGAGCTGCATCCGGATTGTGTCGATCTTTGCAGAAGCCTTTTACGTCGAAATCCAGATGAGAGATTAACATTCAAGGCGTTTTTCAATCACGATTTCGTACGTGATAACAACAGGTCCGTTGTGAATATTGAGCGGTTTCATTCGCATCAATCAGAAAGCTCGATGGTTAATCAATTAGTTGGCTCTGCATCCGAGAAGGTGTCTCAAGCACATTCCGAGTATCATGTTGAGAAAGCTTCTCATTTAATGGAGTCCGTTGAAAAAAGTTATGTCCTCGTCAATTCTCATTTTGCGTCATTGGAGGATTTCTCTGACTACTTCGAGGCATCCGCGCAAGATAACCCCTCAAGCAAGGTTTCTATCCGTGCTTCAAACAGGTTAGACTTGTTGCATAAGTACGTGCAAGTCCTTGAAGAACTTTCGCAAGAAAAGTATAACACAGGACTGTATCTAGAATCACTTGCAGTCGAGTTGGTGGTTTTGGCTATATGGAAGAAAGCTCTAGACATTTGTAGCACTTGGTCAGCCCCAATTTCTAAGAACGAGTTGCACGGAAGCAGTTCAGTTAACGAGTCCGTAATTGCCTGTGGAGACGCGAGCTTATCACATACTATCGATCATAAAATAAATTTCAACGATCGTCCTTCCGTCTCCTTGTGGGCCAAACATGGATTTATCAACGCAGTCGATCGTGCCGAGAAACTATCATATCATATTCAAAACATGGATGGTGCAGTTGAGATGCCAGACGCAATCGAGATTATATTCACAGAAGCACTCTTAATCGGGACAAATGGTGCTGTAGATGAGTACATGAACAACAAAGATAAGTCTGCAACATCTTACTCAAAAGCAATGCTTCTACTTTCATTTATTGTGGAAGAAGCAGAGAATCTTCCACTGAATCCTCCATTTTCACTTCTTGCTGACGATCATAAGCGAATCGTGCAATATATTCGCAACTTGCGGATTCAAAAAATATCTTTATCAGAGTCACTTTCTGAGGAAGCTCAATAG 1737 0.4226 MDLVGPAMNRLVGDYILGPRIGSGSFAVVWRSRHRISGLEVAIKEIDQTQLSPKVRDNLIKEITILRTIHHPNIIRLFEAIETNDRIYLVLEYCGGGDLAAYIHRYGRVSESIARHFMRQLAAGLQVLQEKNLIHRDLKPQNLLLETTSATPLMKIGDFGFARSLTPLQLADTLCGSPYYMAPEIIQSQKYDAKADLWSVGAILYQLVVGKPPFDGNSQLQLFQNILASTELHFPSKILKELHPDCVDLCRSLLRRNPDERLTFKAFFNHDFVRDNNRSVVNIERFHSHQSESSMVNQLVGSASEKVSQAHSEYHVEKASHLMESVEKSYVLVNSHFASLEDFSDYFEASAQDNPSSKVSIRASNRLDLLHKYVQVLEELSQEKYNTGLYLESLAVELVVLAIWKKALDICSTWSAPISKNELHGSSSVNESVIACGDASLSHTIDHKINFNDRPSVSLWAKHGFINAVDRAEKLSYHIQNMDGAVEMPDAIEIIFTEALLIGTNGAVDEYMNNKDKSATSYSKAMLLLSFIVEEAENLPLNPPFSLLADDHKRIVQYIRNLRIQKISLSESLSEEAQ* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5025 578 Gene3D Transferase(Phosphotransferase) domain 1 7 352 - -
Psa4g5025 578 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 364 559 IPR045269 GO:0004674|GO:0006914
Psa4g5025 578 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 7 297 IPR045269 GO:0004674|GO:0006914
Psa4g5025 578 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Psa4g5025 578 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Psa4g5025 578 PANTHER BNAC06G18300D PROTEIN 364 559 - -
Psa4g5025 578 PANTHER BNAC06G18300D PROTEIN 7 297 - -
Psa4g5025 578 SMART serkin_6 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g5025 578 CDD STKc_ATG1_ULK_like 21 272 - -
Psa4g5025 578 SUPERFAMILY Protein kinase-like (PK-like) 11 298 IPR011009 -
Psa4g5025 578 Pfam Protein kinase domain 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g5025 578 ProSiteProfiles Protein kinase domain profile. 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5025 Psa-Chr4 437323623 437328610 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5025 11 296 CBL-interacting serine-threonine protein kinases AT2G30360 34.130 1.07e-51 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Psa4g5025 Pkinase 2.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5025 - K08269 gmx:100782508 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g5025 4 437323623 437328610 Psa4g5025 4 437323623 437328610 ECH