Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5016 ATGTATGAATGTTTTAGTGCTAATCTATCACCTCAAGATCATGATCTCTCAAAAACTCTCATGTTCCTTGGCCTTAATCCTTACAAAGGAGCATGGCCAGCTTCTGAGTATGGCAAAGATATCATTGTTGGTGTAATAGACACTGGTGTTTGGCCAGAAAGTGAAAGTTTCAAAGACGATGGAATGACTCAAATACCCTCAAAATGGAAAGGGAAATTATGTCAATTTGAAAACTCCAACCATTCATCTTTTTGCAACAAGAAACTCATTGGAGCTAGATTCTTCAACAAAGGGTTCTTAGCAAAATATCCCGACCTTAGTAAAACCATTGCGAACGACTCACGCGACACAATAGGCCATGGAACGCATACTTCAACAACGGCAGCTGGAAGCAAAGTGGATGGTGCATCTTTCTTTGGTTATGCGAATGGAACTGCAAGAGGAATAGCTTCAATGTCGAGAGTAGCCATATACAAGACTGTGTGGGGAACAGAGGGAGATGCACTTTCATCTGATATAATAGCTGCAATTGACGCCGCATTATCAGAAGGTGTCGATGTTCTTTCCATGTCAATAGGCTATAACAATGTATCTTTGTACGAAGATCCCGTTGCAATAGCCACATTTGCAGCTATGGAAAAAGGTGTCTTTGCGTCTACTTCAGCTGGTAATAGTGGACCTTACTCTCACACCCTTCACAATGGAGTACCTTGGGTGATAAACGTTGCTGCCGGTACTTCGGATCGCGAATTCCGTGGAAATCTTACACTCGGTAATGGAGTTTCACTCACTGGCTTATCTTCTTATGTAGGAAATTTCTCTGCTACCAATATCCCGGTTGTGTTCGTGGATATGTGTGAAAATCCTGAAGAACTAATCAAATTTAAGAACAAGATTGTAGTTTGTGAAGACAAAACAGGATTTCTTTCTACACAATTTTATAATGCGTTTTCCGCCAAAGTTGTTGGAGGTGTTTTCATTTCAAACGCATCACAACAAGATCTATCACAATTCTTATGGTATCCGCTTCCGTCCATCGTCATTAATCAGAAAGACGGAGAAATTGTCAAAGATTACATACTGAGAAACTCTAACTCTAGTAAAATACAAAACATGTCTTTCAAGAAAACAGGTTTTGGTGCTAAACCATCACCTAGTGTTGATTCTTATAGTTCAAGAGGGCCATCCAATAGTTGTCCATATGTGTTGAAACCCGACATTACAGCTCCTGGTACATCAATCTTAGCTGCATGGCCTGCAAATATTCCTGTGTTGGATTTTGGAACCAAAGTCTACAACAACTTCAAGTTTTTATCAGGAACATCTATGTCATGTCCTCATGTTGCTGGCGTGGCCGCACTTTTAAAAGGCGCGCGTCCGGATTGGAGCCCCGCAGCTATTAGATCAGCAATGATGACAACATCAGACATATTTGATAATACTAAGAAACCCATCAAAGACATTGGAAATGATAACAAAGATGCAACCCCTTTAGCATTGGGAGCTGGTCATGTTAACCCTAATAGAGCACTTGATCCTGGTCTTGTTTATGATGCTGGTGTACAAGATTACGTTAATCTTCTTTGTGCACTTAACTTCACTCAACAAAACATCACTGCCATTACAAGATCCTCTTCCAACGATTGCTCTAAACCTTCCTTAGATCTTAACTACCCTTCTTTTATTGCTTTCATAAAAGCTGGAAATACTTCTGTAAGGACAACTCATAACTTTCGCAGAACAGTTACCAACGTTGATGAAGCACAATCAACTTATTTTGCTAGCATTAGTCCTATTAAAGGGTTTAACATCAGTGTTGTACCAAACAAGTTGGTATTCAAGGAGAAGAACATGAAATTAAGCTTCAAGTTAAAGATTGAGGGCGAAAAAGTGACAAAGAAAAATGAAGTATCTTATGGATATCTCACTTGGAATGATGGGAAACATGTGGATTTGTCATCAGAAGAAGGCTTTAAGGTTGACCTTGTTGTATTTTGGGATAGTTTAAGCTTCGAGGAGGTGGCCACTCCTTCTGATGTACCTCTGTCTCGACAAAAATGGTGGTATAGTGAAACACAATTGCTAGTGGAGGTCGATGACGAACAAGAAATGAGGGAAATCTTTGGTGAGGAGAGGGAACTAATTTTTAATATATGTGTTCATTGA 2166 0.397 MYECFSANLSPQDHDLSKTLMFLGLNPYKGAWPASEYGKDIIVGVIDTGVWPESESFKDDGMTQIPSKWKGKLCQFENSNHSSFCNKKLIGARFFNKGFLAKYPDLSKTIANDSRDTIGHGTHTSTTAAGSKVDGASFFGYANGTARGIASMSRVAIYKTVWGTEGDALSSDIIAAIDAALSEGVDVLSMSIGYNNVSLYEDPVAIATFAAMEKGVFASTSAGNSGPYSHTLHNGVPWVINVAAGTSDREFRGNLTLGNGVSLTGLSSYVGNFSATNIPVVFVDMCENPEELIKFKNKIVVCEDKTGFLSTQFYNAFSAKVVGGVFISNASQQDLSQFLWYPLPSIVINQKDGEIVKDYILRNSNSSKIQNMSFKKTGFGAKPSPSVDSYSSRGPSNSCPYVLKPDITAPGTSILAAWPANIPVLDFGTKVYNNFKFLSGTSMSCPHVAGVAALLKGARPDWSPAAIRSAMMTTSDIFDNTKKPIKDIGNDNKDATPLALGAGHVNPNRALDPGLVYDAGVQDYVNLLCALNFTQQNITAITRSSSNDCSKPSLDLNYPSFIAFIKAGNTSVRTTHNFRRTVTNVDEAQSTYFASISPIKGFNISVVPNKLVFKEKNMKLSFKLKIEGEKVTKKNEVSYGYLTWNDGKHVDLSSEEGFKVDLVVFWDSLSFEEVATPSDVPLSRQKWWYSETQLLVEVDDEQEMREIFGEERELIFNICVH* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5016 721 Gene3D - 528 654 - -
Psa4g5016 721 Gene3D - 248 380 - -
Psa4g5016 721 ProSiteProfiles Serine proteases, subtilase domain profile. 17 511 - -
Psa4g5016 721 CDD Peptidases_S8_3 22 476 IPR034197 -
Psa4g5016 721 PRINTS Subtilisin serine protease family (S8) signature 38 57 IPR015500 -
Psa4g5016 721 PRINTS Subtilisin serine protease family (S8) signature 116 129 IPR015500 -
Psa4g5016 721 PRINTS Subtilisin serine protease family (S8) signature 439 455 IPR015500 -
Psa4g5016 721 ProSitePatterns Serine proteases, subtilase family, serine active site. 440 450 IPR023828 -
Psa4g5016 721 CDD PA_subtilisin_like 254 365 - -
Psa4g5016 721 Pfam Subtilase family 38 486 IPR000209 GO:0006508|GO:0008236
Psa4g5016 721 Gene3D Peptidase S8/S53 domain 40 524 IPR036852 GO:0004252|GO:0006508
Psa4g5016 721 Pfam Fibronectin type-III domain 555 650 IPR041469 -
Psa4g5016 721 PANTHER PUTATIVE-RELATED 11 650 - -
Psa4g5016 721 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 11 650 IPR045051 -
Psa4g5016 721 SUPERFAMILY Subtilisin-like 28 515 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5016 Psa-Chr4 436906516 436909523 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5016 2 672 Subtilisin-like Serine Gene Family AT5G67090 43.396 1.85e-174 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5016 - - gmx:100786751 797.349