Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4986 ATGAAGCTTCATGATTTTGATATCACTTTTCATTTGGATTTTTCAGAGCTAAGAAGTTTTTCATGGCAGCCATTACTCTCACCGTGCTTATTGGAACATGTGACTTTACCTCTAGAATTTGGATTCTTTGTGATATTGTTAGTCCAACTCTTTCGAAATTGCATGAACAATGTTGTCACCAAGCAAAACAAGCTCTCAGAAGTGAATCCAAACGCTATAAAATTCGGTTTCGCTTCCAAAATCAGCTTATTTTGCACCACTTTATTGTTTGCTGTTCATGCCTTAATGCTGGTTTTGATCATCAATCATGATGAGCCTGAGTGTACCTCGAAGCTTCAAGCTTTAACATCGGAGATAGCGCAAGTGTTATCGTATGCAATTGTTGTGATCGCAATAGGCAAGATGTTGAAAAGGCCAAACGCTTATTTCCCTTGGATTGTAAGAGCTTGGTGGGTTTTCAGTTTCCTTTTGAGCATTATCAGCACCATTCTTCATGTTCATTTCAGCGTCGAAAAAAACGGTACAATTGGTGTAACGGAGTATGCTGATCTTCTTGGTTTGGTTTCCTCAACGTGTCTTTTAGTCGTTTCGACAAGAGGCAAAACAGGCATAGATATCATTGCGACAAAAAATGGAAGTATAGCTGAACCACTTTTGGGAGAGAAAAACGAGAAACATTCCTCTGAGTTTGTACGAGAATCGTCGCCATATGGAAAAGCTACACTTTTTCAGTTGATAACTTTCTCATGGCTCAATCCATTGTTTGCAGTAGGGTATAAGAAACCTCTTCAATTGAATGACATTCCTGATCTTGACATTAAGGACTCTGCTGAATATCTGAATTGCTCGTTTGACGAGAGTCTACGACAGGTTAAGGAGAAAGACGGAACTACAAATCCGTCTATCTACAAGGCGATTTATTTATTTGCTAGGAAGAAAGCGGCGATTAACGCGTTTTTCGCGATAATATGTGCTTCCGCGTCTTACGTTGGTCCATATTTGATAACTGACTTTGTGAATTTCCTCACTGAGAAGGAAATCCGCGGAGTAAAGAGCGGATACCTTTTGTCGTTAGGTTTCTTATGTGCTAAAATGGTTGAGACCATAGCTCAAAGGCAATGGATTTTCGGTGCTCGGCAGTTAGGTCTTCGATTAAGAGCAGGGTTGATAGCACATATATACAAGAAGGGTTTACATCTGTCTAGCCGATCGCGTCAAAGTCATTCCGGTGGCGAGATAATGAACTACATGAGTGTAGATGTGCAGAGAATTACCGATTTCGTTTGGTACGTAAACGTAATATGGATGCTGCCGATTCAAATTTCTTTAGCTGTTTTCATTTTGCAAACAAATCTTGGATTAGGTTCATTAGCTGCATTAGCTGCGACGCTAGCTGTTATGGCTTTGAATATACCGCTAACGAAAATACAGAAAAGATACCAAACCAAGATCATGGATGCGAAAGACAACAGAATGAAAACCACTTCAGAAATTCTCAAAAACATGAGGACTTTGAAACTTCAAGCATGGGATAGTGAATTTTTCCAAAGGATAGCATCATTGAGAATCGTCGAATATAGTTGGCTATTGAAGTCGTTAAGACAACAAGCGTTTTCCGCGTTTATCTTCTGGGGTTCACCTACATTCATTTCAGTGATAACCTTTTGGACATGTATGTTCTTAGGGATTGAACTAACAGCCGGAAGAGTCTTATCCGCATTCGCGACGTTTCGAATGTTACAGGACCCTATCTTTAGTCTACCTGATTTACTCAATGTCATTGCTCAAGGAAAAGTTTCAGTCGATAGGATCGCTTCGTTTCTTAAGAAGGAAGAAATCCAACATGATGCTATTGAATACGTCGCAAACGACAAAACAGAATTTGATGTTGCTGTTGAGAGAGGAAGATTCAGTTGGGATCCTGAGTCAACAACTCCAACCCTTGATGAAATCGAGTTGAAAGTTAAGAGAGGAACGAAGGTTGCAATTTGCGGTTCTGTAGGTTCAGGGAAATCTAGTGTGCTCTCGGGGATTCTGGGAGAGATATATAAACAATCAGGGAATGTTAAGATTAGTGGAACAAAAGCTTATGTTCCACAATCTGCATGGATACTTACTGGAAATATAAGGGATAATATAACCTTTGGAAAAGAGTTTGATGAAGATAAGTACGAGAAAACCGTTGAAGCATGTGCGTTGAAGAAGGACTTTGAGCTATTCTCATGTGGTGATTTGACTGAGATTGGTGAAAGAGGGATTAATATGAGTGGTGGACAGAAACAAAGGATACAGATTGCTAGAGCAGTTTATCAAGATGCTGATATATACCTTTTTGATGATCCTTTCAGTGCTGTTGATGCGCATACCGGGACTCACCTCTTTCAGGAATGTCTTATGGGGATTCTCAAAGAGAAAACTATACTTTTTGTTACACACCAAGTTGAGTTTCTTCCAGCAGCAGATCTCATTCTGGTAATGCAAAATGGAAGGATTGCACAAGCTGGAACATTTGAAGAACTTCTAAAGCAAAATATAGGATTTGAAGTATTAGTTGGTGCTCATAGCAAAGCACTAGAGTCGGTTCTTATGGTTGAAAACACAAGTAAAACAAATTTAAATCCAATACCTGAAGGAGAATGCATCACCTACTCACACTCAAGTTCTGAACTTTTGCACACAAAGCTCGACACAGTGCAAGATAATCCACCTGATAACAAAGGAAACAATGACGGAAAATTGGTTCAAGATGAAGAACGAGAAACAGGAAGCATATCAAGAGAAGTTTATTGGGCTTATTTGACAACTGTTAAAGGAGGACTTCTTGTTCCAATCATAATATTGGCACAGTCGTCGTTCCAAATTCTTCAGATTGCCAGTAACTATTGGATGGCTTGGGTTTGTCCTACAAAATCTGATGCTAAGCCAATATATGATATGAATTTCATATTACTTATTTATATGGTACTATCTGTTGCTGGTGCGTTATGTGTTCTTCTGAGAGCCATGTTAGTGTTAAATGTTGGACTTTGGACTGCACAAAGTTTTTTCACAAGAATGTTGCATAATGTGCAAAGAGCCCCCATGTCCTTTTTCGATTCTACCCCAACTGGAAGAATCTTGAACAGAGCCTCAACAGATCAAAGTGTGTTAGACTTGGAAATAGCAAACCGTGTAGGATGGAAAGCTGGTCGGTTAGCACAAGATACAGATTACTCCAATTCTTACCATTTTTCAGAATCTTTAGCAGAGCTGCATCCAAGACGAGCTTTCGATCAAGGAAGGCCGTTTCATGAGCCACAATCCTGTCCTTTGGATGCTTTTCTCAAGCGTCAGTGTGGTTTCACACATATGATATCAGTTGAAAGAATTCTTCAATATACAAATTTAGCAAGTGAATCACCTCTTGTGATTGAAAACTGCCGGCCACCAAGAAACTGGCCAGAAACTGGAACAATATCTTTCCAAAACTTGCAGATACGTTATGCTGAACATCTCCCATCGGTGCTGAAAAACATCACTTGCACATTTCCTGGAAGGAAGAAAATCGGCGTCGTAGGACGAACCGGCAGTGGGAAATCAACACTCATACAAGCAATATTCAGGGTTGTTGAACCAAGAGAGGGATGCATCATGATTGACAATGTGGACATATGTGAGATAGGTCTCCATGACTTAAGGTCAAGGCTGAGCATTATCCCACAAGATCCAGCCTTGTTTGAAGGCACGGTTAGAGGAAACCTGGATCCTCTTGAGCAATACTCTGACATTGAAGTCTGGGAGGCTCTAGATAAATGTCAGCTAGGTCACCTAGTGAGAGCCATGGATGAGAAGTTGGACTCCCCAGTGGTTGAAAATGGTGATAACTGGAGTGCTGGACAAAGGCAATTATTTTGCCTTGGAAGAGCCTTACTGAAGAAAAGCAGCATATTAGTACTAGATGAAGCAACAGCCTCAGTGGACTCTGCAACTGATGGAGTGATACAGGATATCATCTGTCAAGAGTTCAACAATCGAACAGTTGTCACAATAGCTCATCGAATCCACACAGTTATAGACAGCGACTTGGTTTTGGTTCTCAGTGATG 4084 0.403 MKLHDFDITFHLDFSELRSFSWQPLLSPCLLEHVTLPLEFGFFVILLVQLFRNCMNNVVTKQNKLSEVNPNAIKFGFASKISLFCTTLLFAVHALMLVLIINHDEPECTSKLQALTSEIAQVLSYAIVVIAIGKMLKRPNAYFPWIVRAWWVFSFLLSIISTILHVHFSVEKNGTIGVTEYADLLGLVSSTCLLVVSTRGKTGIDIIATKNGSIAEPLLGEKNEKHSSEFVRESSPYGKATLFQLITFSWLNPLFAVGYKKPLQLNDIPDLDIKDSAEYLNCSFDESLRQVKEKDGTTNPSIYKAIYLFARKKAAINAFFAIICASASYVGPYLITDFVNFLTEKEIRGVKSGYLLSLGFLCAKMVETIAQRQWIFGARQLGLRLRAGLIAHIYKKGLHLSSRSRQSHSGGEIMNYMSVDVQRITDFVWYVNVIWMLPIQISLAVFILQTNLGLGSLAALAATLAVMALNIPLTKIQKRYQTKIMDAKDNRMKTTSEILKNMRTLKLQAWDSEFFQRIASLRIVEYSWLLKSLRQQAFSAFIFWGSPTFISVITFWTCMFLGIELTAGRVLSAFATFRMLQDPIFSLPDLLNVIAQGKVSVDRIASFLKKEEIQHDAIEYVANDKTEFDVAVERGRFSWDPESTTPTLDEIELKVKRGTKVAICGSVGSGKSSVLSGILGEIYKQSGNVKISGTKAYVPQSAWILTGNIRDNITFGKEFDEDKYEKTVEACALKKDFELFSCGDLTEIGERGINMSGGQKQRIQIARAVYQDADIYLFDDPFSAVDAHTGTHLFQECLMGILKEKTILFVTHQVEFLPAADLILVMQNGRIAQAGTFEELLKQNIGFEVLVGAHSKALESVLMVENTSKTNLNPIPEGECITYSHSSSELLHTKLDTVQDNPPDNKGNNDGKLVQDEERETGSISREVYWAYLTTVKGGLLVPIIILAQSSFQILQIASNYWMAWVCPTKSDAKPIYDMNFILLIYMVLSVAGALCVLLRAMLVLNVGLWTAQSFFTRMLHNVQRAPMSFFDSTPTGRILNRASTDQSVLDLEIANRVGWKAGRLAQDTDYSNSYHFSESLAELHPRRAFDQGRPFHEPQSCPLDAFLKRQCGFTHMISVERILQYTNLASESPLVIENCRPPRNWPETGTISFQNLQIRYAEHLPSVLKNITCTFPGRKKIGVVGRTGSGKSTLIQAIFRVVEPREGCIMIDNVDICEIGLHDLRSRLSIIPQDPALFEGTVRGNLDPLEQYSDIEVWEALDKCQLGHLVRAMDEKLDSPVVENGDNWSAGQRQLFCLGRALLKKSSILVLDEATASVDSATDGVIQDIICQEFNNRTVVTIAHRIHTVIDSDLVLVLSD 1361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4986 1361 CDD ABCC_MRP_domain1 630 830 - -
Psa4g4986 1361 CDD ABCC_MRP_domain2 1150 1361 - -
Psa4g4986 1361 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 630 853 IPR003439 GO:0005524
Psa4g4986 1361 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 315 596 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Psa4g4986 1361 SUPERFAMILY ABC transporter transmembrane region 942 1096 IPR036640 GO:0005524|GO:0016021
Psa4g4986 1361 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 122 1065 - -
Psa4g4986 1361 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1116 1360 - -
Psa4g4986 1361 SUPERFAMILY ABC transporter transmembrane region 311 612 IPR036640 GO:0005524|GO:0016021
Psa4g4986 1361 MobiDBLite consensus disorder prediction 897 919 - -
Psa4g4986 1361 Gene3D - 1135 1361 IPR027417 -
Psa4g4986 1361 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1144 1361 IPR027417 -
Psa4g4986 1361 SMART AAA_5 657 830 IPR003593 -
Psa4g4986 1361 SMART AAA_5 1178 1361 IPR003593 -
Psa4g4986 1361 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 944 1051 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Psa4g4986 1361 PANTHER - 122 1065 - -
Psa4g4986 1361 PANTHER - 1116 1360 - -
Psa4g4986 1361 ProSitePatterns ABC transporters family signature. 755 769 IPR017871 GO:0005524
Psa4g4986 1361 Gene3D ABC transporter type 1, transmembrane domain 287 616 IPR036640 GO:0005524|GO:0016021
Psa4g4986 1361 Pfam ABC transporter transmembrane region 946 1052 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Psa4g4986 1361 Pfam ABC transporter transmembrane region 316 580 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Psa4g4986 1361 Pfam ABC transporter 648 782 IPR003439 GO:0005524
Psa4g4986 1361 Pfam ABC transporter 1169 1317 IPR003439 GO:0005524
Psa4g4986 1361 Gene3D ABC transporter type 1, transmembrane domain 886 1060 IPR036640 GO:0005524|GO:0016021
Psa4g4986 1361 CDD ABC_6TM_ABCC_D1 316 604 IPR044746 GO:0140359
Psa4g4986 1361 Gene3D - 628 859 IPR027417 -
Psa4g4986 1361 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1152 1361 IPR003439 GO:0005524
Psa4g4986 1361 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 625 846 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4986 Psa-Chr4 432488249 432494531 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4986 610 874 Calmodulin-binding Proteins AT2G36910 30.282 1.30e-23 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4986 - - gmx:100817486 1602.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4986 4 432488249 432494531 Psa4g4986 4 432488249 432494531 ECH