Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4905 ATGACTACTACATTCGTCCACAACCGGAGCCAACACTCCGGCCACCGTGCCACGCCGGATAACATCTCCCGTTCATCAGACTTCAGCACTTCGAGTCAATCAACCACCTCATCTTTCGGACGGAATCCAGTTGTTGCGGCCGCTATGTCGGTTGCCGGATTGTTCGCAGCTTGCTTCACGCCGCCGGACGCTAACAATTCCAAGAGTCTTGTTGTGGATTCTGAGGAGTTCAAATCTTCTTCTGGTTCTGTTGCATCAAATGCTTCAAGAGCTGGTAGTCAGAGAGGGCGTGGCTCGAGCCGAGGTGCCAACATTAGTTTATACAACACCACAATCCAGGGGAATGAGTCTGGCATTGTGAAGTATACCATGGAGGAAATTATCAAAGTCACCAGAAACTTCTCTCCTTCTTTCAAGATTGGTCAAGGTGGTTTTGGGGCAGTTTACAAGACCAAACTCCTGGATGGAACTATTGTCGCAGTAAAGCGAGCTAAGAAGAGTGTACACGAGAAACATTTAGGTTCGGAGTTCCAGAGCGAGGTACAAACACTATCACGGGTCGAGCATTTGAACTTGGTAAAATTCTATGGATACTTGGAGCTAGGGGATGAAAAAATCGTTGTTGTGGAGTATGTTCCCAATGGAACCCTCAGAGAACATCTAGATTGCATTCATGGAAACGTTCTCGACCTCGCTGCTCGTCTAGACATTGCAATTGATGTATCTCATGCTCTCACCTATCTTCATGTGTATATGGGTATATAA 765 0.468 MTTTFVHNRSQHSGHRATPDNISRSSDFSTSSQSTTSSFGRNPVVAAAMSVAGLFAACFTPPDANNSKSLVVDSEEFKSSSGSVASNASRAGSQRGRGSSRGANISLYNTTIQGNESGIVKYTMEEIIKVTRNFSPSFKIGQGGFGAVYKTKLLDGTIVAVKRAKKSVHEKHLGSEFQSEVQTLSRVEHLNLVKFYGYLELGDEKIVVVEYVPNGTLREHLDCIHGNVLDLAARLDIAIDVSHALTYLHVYMGI* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4905 254 Gene3D Transferase(Phosphotransferase) domain 1 120 253 - -
Psa4g4905 254 Pfam Protein tyrosine and serine/threonine kinase 139 249 IPR001245 GO:0004672|GO:0006468
Psa4g4905 254 MobiDBLite consensus disorder prediction 1 37 - -
Psa4g4905 254 PANTHER CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 2 6 252 - -
Psa4g4905 254 ProSitePatterns Protein kinases ATP-binding region signature. 140 166 IPR017441 GO:0005524
Psa4g4905 254 ProSiteProfiles Protein kinase domain profile. 134 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g4905 254 SUPERFAMILY Protein kinase-like (PK-like) 117 249 IPR011009 -
Psa4g4905 254 PANTHER RECEPTOR-LIKE PROTEIN 55 6 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4905 Psa-Chr4 424695449 424697937 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4905 92 249 Trihelix Transcription Factor Family AT1G70460 42.405 1.20e-27 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Psa4g4905 PK_Tyr_Ser-Thr 7.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4905 - - cam:101500599 372.859