Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4885 ATGGTGAAAAGGAAGAACTCAGTCAACCGAAAAGAAAAATTTAAAGTAAACGTTAAAAAACAAAATCATCCAAAAATCCAAATTACACATAGCAATCATGAAGAAGTTGAGATTATTGACGGAGTGAAGCTTTATCTCAAAGATGGTGGACATCAATTGACTTCAACAAATAAGTATAAAGATGTTCGACTCAGATGGAGAAGATACTCGACTGAGATTCAAGATCCATTTGCTAAGAAAAAAATATGGTTAGGTACTTTTGATACTGAAATACAAGCTGCTATGGACGAATATGAAGAAAGCTGA 306 0.3301 MVKRKNSVNRKEKFKVNVKKQNHPKIQITHSNHEEVEIIDGVKLYLKDGGHQLTSTNKYKDVRLRWRRYSTEIQDPFAKKKIWLGTFDTEIQAAMDEYEES* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4885 101 SUPERFAMILY DNA-binding domain 63 95 IPR016177 GO:0003677
Psa4g4885 101 Gene3D AP2/ERF domain 57 98 IPR036955 GO:0003700|GO:0006355
Psa4g4885 101 PIRSF PTI6 4 101 IPR017392 GO:0003700
Psa4g4885 101 ProSiteProfiles AP2/ERF domain profile. 58 101 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4885 Psa-Chr4 422240176 422241108 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4885 54 94 AP2-EREBP Transcription Factor Family AT1G12980 57.143 4.65e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4885 - K09286 cam:101510667 73.1738