Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4865 ATGGAACATACGATTGTGACTGTGCTTCTTCTCCTTATGCTTCTTCTCATCTTCATCTTCCTCTTTTTTCTCTTCAAACCATGGCGCTTCTTTTTCTCTTCTCGTTTTCGTTCTTCAATCCAACAGGGTTCTGTTGGTGAATTAGACCGACCACTTGTTGTTGATGATGATGCTAATGCTTCGTTGAATAATGAATTGCCCAGAGATTATGATCTTGAAGGTGCCTGTTATCCTAATGAAGTTAATTTTCGTTCTCCCAGAACACATGGACAAGGACTTGTTCATAAGCAGAGGCTTCATAATTTTTCTATTCCGCCTAATTTTCATCAAGGTGTCGCCGGTGGTGCTAATGATACTTTGATTGTTGATGTAATCTCTGATCATTCTGAGCCTCTTGTTGTTGCTGATGTTTCTCAAATATTTAAGCTTCCTCCTCCACCGCTTTTAGCTCAAATTCCGCCCAAACAGAGTTATCAAAATGATAGGTTGCAGGATTTTGTGCAAAAGGATATCACTGAACAAAGAAGCTGCCTCACTTTGGAGGTAATCAGTGGTCCTTCTTGCGGGCAATGTTGGTCTGTTCAGTCGACAAATCCCTCTCGTCTCCCGCTGACGTTGGGAAGGGTTTCTCCTAGTGATTTGTTGATCAAGGACTCGGAAGTGTCGGGAAAGCATGCTTTGATCAATTGGAATTTGGATAATTTGAAATGGGAGTTGGTTGATATGGGTAGCTTGAATGGAACACTTTTGAATTCTAAGTCAATCAACCATCCTGACACTGGAAGTAGGCATTGGGGAGATCCAATGAATCTTGCTAATGGAGATGTTATAACACTTGGAACAACATCAAAAATAATTGTTCATATTACTTCGCAAAACCATCATCACATTCCCTTTGGAGTTGGTATGACATCAGATCCCATGTCTTTGCGTCGAGGAGGAAAGAAACTTCCTATGGAGGATGTTTGCTATTATCACTGGCCTTTACCTGGGCTAGATCAGTTTGGTATTTTTGGCATTTGTGATGGGCACGGTGGTGATGGGGCTGCTAAAGCTGCTAGCAAACTTTTTCCTGAAGTAATTGCTAGTATATTATCGGATTCATTAAAAAGGGAGAGGGTTTTCTCACTTCATGATGCTTCGGATATTCTTCGAGATGCATTTTCTCAAACAGAAGCACGCATAAACAACTTCTATGAGGGATGTACAGCAACATTGCTCCTGGTGTGGGCTGATTGTGATGATAATTTCTATGCACAGTGTGCAAACGTTGGAGATTCTGCCTGCATTATGAGTGTTAATGGGCAACAAATCCAAATGACAGAAGATCACAAGATAAGCAATTATTCTGAAAGACGCCGAATTGAAGAGTCGGGGGAACCATTGAAAGATGGGGAAACGCGACTATATGGTATAAATCTTGCAAGGATGCTCGGCGACAAATTCCTAAAACAACAGGATTCTCGGTTCAGTTCACAACCTTATATAAGTGAGGCTGTGCATATTCACCAAGCAAGCAAGGCTTTTGCTGTTCTAGCTAGTGATGGGTTATGGGACGTCATCAGCATGAAGAAGACAATTCAGCTAGTGCTTCAGATGAGGGAGCGTTACAATACAGAAGGAGACAATACAGCAGAAAAGATTGCTAGTTTGTTGTTGAATGAGGCTAGAACACTCAAAACGAAGGATAATACCTCCATAATATTCTTAGATTTTGATACATTCAATAGATTCTCTTGTAAAGTTGAATCCTAG 1755 0.4091 MEHTIVTVLLLLMLLLIFIFLFFLFKPWRFFFSSRFRSSIQQGSVGELDRPLVVDDDANASLNNELPRDYDLEGACYPNEVNFRSPRTHGQGLVHKQRLHNFSIPPNFHQGVAGGANDTLIVDVISDHSEPLVVADVSQIFKLPPPPLLAQIPPKQSYQNDRLQDFVQKDITEQRSCLTLEVISGPSCGQCWSVQSTNPSRLPLTLGRVSPSDLLIKDSEVSGKHALINWNLDNLKWELVDMGSLNGTLLNSKSINHPDTGSRHWGDPMNLANGDVITLGTTSKIIVHITSQNHHHIPFGVGMTSDPMSLRRGGKKLPMEDVCYYHWPLPGLDQFGIFGICDGHGGDGAAKAASKLFPEVIASILSDSLKRERVFSLHDASDILRDAFSQTEARINNFYEGCTATLLLVWADCDDNFYAQCANVGDSACIMSVNGQQIQMTEDHKISNYSERRRIEESGEPLKDGETRLYGINLARMLGDKFLKQQDSRFSSQPYISEAVHIHQASKAFAVLASDGLWDVISMKKTIQLVLQMRERYNTEGDNTAEKIASLLLNEARTLKTKDNTSIIFLDFDTFNRFSCKVES* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4865 584 SMART FHA_2 203 255 IPR000253 GO:0005515
Psa4g4865 584 Pfam FHA domain 205 280 IPR000253 GO:0005515
Psa4g4865 584 ProSitePatterns PPM-type phosphatase domain signature. 337 345 IPR000222 GO:0043169
Psa4g4865 584 PANTHER PROTEIN PHOSPHATASE 2C 33 583 IPR015655 GO:0004722|GO:0006470
Psa4g4865 584 ProSiteProfiles PPM-type phosphatase domain profile. 300 572 IPR001932 -
Psa4g4865 584 ProSiteProfiles Forkhead-associated (FHA) domain profile. 204 255 IPR000253 GO:0005515
Psa4g4865 584 SUPERFAMILY SMAD/FHA domain 177 287 IPR008984 GO:0005515
Psa4g4865 584 Gene3D - 309 580 IPR036457 -
Psa4g4865 584 SMART PP2C_4 294 570 IPR001932 -
Psa4g4865 584 SUPERFAMILY PP2C-like 313 573 IPR036457 -
Psa4g4865 584 Gene3D - 172 308 - -
Psa4g4865 584 Pfam Protein phosphatase 2C 312 565 IPR001932 -
Psa4g4865 584 CDD FHA 178 283 IPR000253 GO:0005515
Psa4g4865 584 PANTHER PROTEIN PHOSPHATASE 2C 70 33 583 - -
Psa4g4865 584 CDD PP2Cc 312 572 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4865 Psa-Chr4 421104029 421109958 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4865 23 574 PP2C-type Phosphatase Gene Family AT5G19280 56.055 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4865 K01090 - gmx:100170642 848.58