Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa4g4850 | ATGGAATCATTTGTGACTTTCAAAGATGAAGTCCCTTCTAGTGGAGTTATCAAACCACTCTCCAACGAGCAGGAGATGCTCTATGGAGATACAATCTTCAACATGAAACGCCTCATTGGCAGAGTTGATACTGATCCAGTAGTCCGTGCTAGTAAGTATCTCCCTTTTCTTGTGCAGACCTTAGATATTGGCGTTCAACCATACATTGCTGCATTAGTCAACAATGTCTGGAGAGCCACTACCCTAGAAGAAGCCCTTGCAATGATTCTGATGGATTTAAGAGTGATGACGAAAACTCATCTGAAAGGACCAATAAAAGATGCAGTGCTTACAGTTCCAGATGATGCCCGAACCAACAGCAGTGGCATATGTAGACTGCAACAACAGAAAGCTTCTCAGAAATCTATGGGCAGTGGAAGTGAGAAAATTGCTCTCATTTTCAATATAGGTGCTTGTTTTTGTGACGTTGCTGTGACTGCTACCGGTGGAGGAGTATCCCAGATAAAAGCGTTGGCAGGAAGTACTATTGGTGGAGAAGATTTGCTTCAGAATATTATGCGTCATCTCTTACTGGATTTTGAAACTACATTCAAGAACCGTGGGATCAAAGAAATTGAATCAATCGCATTGCTTCGAGTTGCAACCCAGGATGCAATTCATCAGCTTTCGTCTCTAACCAGTGTTCAGGTCAATGTAGAATTGGGAGATGGTTTGAAGGTATACAAGGTTGTTGACAGTGCTGAGTTTGAGAAGGTAGAAGCTGAAAATGTAAATGATGTGATAATTGTTGGTGGATGTTCTTATATCCCAAAGGTGAAGAATATTGTTACCAACATATGCAAAGGAACCGAATTTTATAGTGGTATAAATCCTTTGGAAGGCGCCGTTTGTGGTGCGGCAACCAAAGGAGCTATCGCTTCAGCACATAAGGATCTACTTTTTACAACTACTCATGACTATCAAACCGAGGCACTGATACCTGTCTACGAAGGCGGGGAGGGAAAGCAGCCAGAAGAAAACCACTTGTTGGGATATTTCAAGATAATGGCAATACCTGACGCACTAAAAGGAGTTCCTGAAATCACTGCAGTTCCTGTGATGCCTATGGTTGATGATGCGCATGGTTGGTGTGCTGAGGCCCTACATAGAACCTTTGGTGACACAATGGATTTGGTTACTCTCAACAAAGGCACAAGTTGA | 1200 | 0.4258 | MESFVTFKDEVPSSGVIKPLSNEQEMLYGDTIFNMKRLIGRVDTDPVVRASKYLPFLVQTLDIGVQPYIAALVNNVWRATTLEEALAMILMDLRVMTKTHLKGPIKDAVLTVPDDARTNSSGICRLQQQKASQKSMGSGSEKIALIFNIGACFCDVAVTATGGGVSQIKALAGSTIGGEDLLQNIMRHLLLDFETTFKNRGIKEIESIALLRVATQDAIHQLSSLTSVQVNVELGDGLKVYKVVDSAEFEKVEAENVNDVIIVGGCSYIPKVKNIVTNICKGTEFYSGINPLEGAVCGAATKGAIASAHKDLLFTTTHDYQTEALIPVYEGGEGKQPEENHLLGYFKIMAIPDALKGVPEITAVPVMPMVDDAHGWCAEALHRTFGDTMDLVTLNKGTS* | 400 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa4g4850 | 399 | Gene3D | Actin; Chain A, domain 4 | 182 | 252 | - | - | |
Psa4g4850 | 399 | SUPERFAMILY | Actin-like ATPase domain | 141 | 305 | IPR043129 | - | |
Psa4g4850 | 399 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 287 | 364 | IPR029047 | - | |
Psa4g4850 | 399 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 366 | 396 | IPR013126 | GO:0005524|GO:0140662 | |
Psa4g4850 | 399 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 1 | 113 | IPR013126 | GO:0005524|GO:0140662 | |
Psa4g4850 | 399 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 308 | 362 | IPR013126 | GO:0005524|GO:0140662 | |
Psa4g4850 | 399 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 251 | 313 | IPR013126 | GO:0005524|GO:0140662 | |
Psa4g4850 | 399 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 126 | 251 | IPR013126 | GO:0005524|GO:0140662 | |
Psa4g4850 | 399 | Gene3D | - | 33 | 88 | - | - | |
Psa4g4850 | 399 | Pfam | Hsp70 protein | 251 | 310 | IPR013126 | GO:0005524|GO:0140662 | |
Psa4g4850 | 399 | Pfam | Hsp70 protein | 140 | 234 | IPR013126 | GO:0005524|GO:0140662 | |
Psa4g4850 | 399 | Pfam | Hsp70 protein | 24 | 113 | IPR013126 | GO:0005524|GO:0140662 | |
Psa4g4850 | 399 | PRINTS | 70kDa heat shock protein signature | 257 | 273 | - | - | |
Psa4g4850 | 399 | PRINTS | 70kDa heat shock protein signature | 289 | 309 | - | - | |
Psa4g4850 | 399 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 308 | 362 | IPR029047 | - | |
Psa4g4850 | 399 | Gene3D | - | 138 | 285 | - | - | |
Psa4g4850 | 399 | PANTHER | HEAT SHOCK 70 KDA PROTEIN 8 | 366 | 396 | - | - | |
Psa4g4850 | 399 | PANTHER | HEAT SHOCK 70 KDA PROTEIN 8 | 1 | 113 | - | - | |
Psa4g4850 | 399 | PANTHER | HEAT SHOCK 70 KDA PROTEIN 8 | 126 | 251 | - | - | |
Psa4g4850 | 399 | PANTHER | HEAT SHOCK 70 KDA PROTEIN 8 | 308 | 362 | - | - | |
Psa4g4850 | 399 | PANTHER | HEAT SHOCK 70 KDA PROTEIN 8 | 251 | 313 | - | - | |
Psa4g4850 | 399 | Gene3D | - | 2 | 115 | - | - | |
Psa4g4850 | 399 | SUPERFAMILY | Actin-like ATPase domain | 25 | 114 | IPR043129 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa4g4850 | Psa-Chr4 | 420559265 | 420560794 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa4g4850 | 3 | 362 | Calmodulin-binding Proteins | AT3G12580 | 28.894 | 1.62e-40 | 150 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa4g4850 | K09489 | - | gmx:100809773 | 484.952 |