Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4850 ATGGAATCATTTGTGACTTTCAAAGATGAAGTCCCTTCTAGTGGAGTTATCAAACCACTCTCCAACGAGCAGGAGATGCTCTATGGAGATACAATCTTCAACATGAAACGCCTCATTGGCAGAGTTGATACTGATCCAGTAGTCCGTGCTAGTAAGTATCTCCCTTTTCTTGTGCAGACCTTAGATATTGGCGTTCAACCATACATTGCTGCATTAGTCAACAATGTCTGGAGAGCCACTACCCTAGAAGAAGCCCTTGCAATGATTCTGATGGATTTAAGAGTGATGACGAAAACTCATCTGAAAGGACCAATAAAAGATGCAGTGCTTACAGTTCCAGATGATGCCCGAACCAACAGCAGTGGCATATGTAGACTGCAACAACAGAAAGCTTCTCAGAAATCTATGGGCAGTGGAAGTGAGAAAATTGCTCTCATTTTCAATATAGGTGCTTGTTTTTGTGACGTTGCTGTGACTGCTACCGGTGGAGGAGTATCCCAGATAAAAGCGTTGGCAGGAAGTACTATTGGTGGAGAAGATTTGCTTCAGAATATTATGCGTCATCTCTTACTGGATTTTGAAACTACATTCAAGAACCGTGGGATCAAAGAAATTGAATCAATCGCATTGCTTCGAGTTGCAACCCAGGATGCAATTCATCAGCTTTCGTCTCTAACCAGTGTTCAGGTCAATGTAGAATTGGGAGATGGTTTGAAGGTATACAAGGTTGTTGACAGTGCTGAGTTTGAGAAGGTAGAAGCTGAAAATGTAAATGATGTGATAATTGTTGGTGGATGTTCTTATATCCCAAAGGTGAAGAATATTGTTACCAACATATGCAAAGGAACCGAATTTTATAGTGGTATAAATCCTTTGGAAGGCGCCGTTTGTGGTGCGGCAACCAAAGGAGCTATCGCTTCAGCACATAAGGATCTACTTTTTACAACTACTCATGACTATCAAACCGAGGCACTGATACCTGTCTACGAAGGCGGGGAGGGAAAGCAGCCAGAAGAAAACCACTTGTTGGGATATTTCAAGATAATGGCAATACCTGACGCACTAAAAGGAGTTCCTGAAATCACTGCAGTTCCTGTGATGCCTATGGTTGATGATGCGCATGGTTGGTGTGCTGAGGCCCTACATAGAACCTTTGGTGACACAATGGATTTGGTTACTCTCAACAAAGGCACAAGTTGA 1200 0.4258 MESFVTFKDEVPSSGVIKPLSNEQEMLYGDTIFNMKRLIGRVDTDPVVRASKYLPFLVQTLDIGVQPYIAALVNNVWRATTLEEALAMILMDLRVMTKTHLKGPIKDAVLTVPDDARTNSSGICRLQQQKASQKSMGSGSEKIALIFNIGACFCDVAVTATGGGVSQIKALAGSTIGGEDLLQNIMRHLLLDFETTFKNRGIKEIESIALLRVATQDAIHQLSSLTSVQVNVELGDGLKVYKVVDSAEFEKVEAENVNDVIIVGGCSYIPKVKNIVTNICKGTEFYSGINPLEGAVCGAATKGAIASAHKDLLFTTTHDYQTEALIPVYEGGEGKQPEENHLLGYFKIMAIPDALKGVPEITAVPVMPMVDDAHGWCAEALHRTFGDTMDLVTLNKGTS* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4850 399 Gene3D Actin; Chain A, domain 4 182 252 - -
Psa4g4850 399 SUPERFAMILY Actin-like ATPase domain 141 305 IPR043129 -
Psa4g4850 399 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 287 364 IPR029047 -
Psa4g4850 399 PANTHER HEAT SHOCK PROTEIN 70KDA 366 396 IPR013126 GO:0005524|GO:0140662
Psa4g4850 399 PANTHER HEAT SHOCK PROTEIN 70KDA 1 113 IPR013126 GO:0005524|GO:0140662
Psa4g4850 399 PANTHER HEAT SHOCK PROTEIN 70KDA 308 362 IPR013126 GO:0005524|GO:0140662
Psa4g4850 399 PANTHER HEAT SHOCK PROTEIN 70KDA 251 313 IPR013126 GO:0005524|GO:0140662
Psa4g4850 399 PANTHER HEAT SHOCK PROTEIN 70KDA 126 251 IPR013126 GO:0005524|GO:0140662
Psa4g4850 399 Gene3D - 33 88 - -
Psa4g4850 399 Pfam Hsp70 protein 251 310 IPR013126 GO:0005524|GO:0140662
Psa4g4850 399 Pfam Hsp70 protein 140 234 IPR013126 GO:0005524|GO:0140662
Psa4g4850 399 Pfam Hsp70 protein 24 113 IPR013126 GO:0005524|GO:0140662
Psa4g4850 399 PRINTS 70kDa heat shock protein signature 257 273 - -
Psa4g4850 399 PRINTS 70kDa heat shock protein signature 289 309 - -
Psa4g4850 399 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 308 362 IPR029047 -
Psa4g4850 399 Gene3D - 138 285 - -
Psa4g4850 399 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 366 396 - -
Psa4g4850 399 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 1 113 - -
Psa4g4850 399 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 126 251 - -
Psa4g4850 399 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 308 362 - -
Psa4g4850 399 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 251 313 - -
Psa4g4850 399 Gene3D - 2 115 - -
Psa4g4850 399 SUPERFAMILY Actin-like ATPase domain 25 114 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4850 Psa-Chr4 420559265 420560794 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4850 3 362 Calmodulin-binding Proteins AT3G12580 28.894 1.62e-40 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4850 K09489 - gmx:100809773 484.952