Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4838 GTCTTGGTCCCATTCCCAAAAAATGGAAGGGAGTTTGTAAAGGCGGTGCTAACTTCACTTGCAATAATAAACTCATCGGAGCACGATTTTATGGTAACACGGATAGTGCAAGAGATGAGGGTGGTCATGGAACTCACACATCATCAACTGCAGGTGGAAGAGAGGTGCAAGGTGTGAGCTTTTTTGATCTTGCAAAAGGCACTGCAAGAGGTGGAGTCCCATCTTCAAGGATTGCTATGTATAAAATATGTGGTTCAGACGGTAAATGCAGTAGTGCTAGTATATTAGGTGCATTTGATGATGCCATTGCGGATGGTGTTGACATCATTTCGCTCTCAGTTGGGGGTCAAGATGCACTAGATTTTTTGAACGATCCTATTGCCATTGCTTCTTTTCATGCCATGGAGAATGGAGTACTCACATCACATTCTGCAGGAAACTCTGGTCCTGGCGTGAGTACTACTTCGAGTGTAGCACCTTGGTTATTTAGTGTTGCAGCAACTACTATAGATCGCAAATTCATTAGTAAGCTCATTCTTGGAAATGGAAAAAGTTTCATTGGTAGTTCAGTTAATACTTTCCCCTCAAATGGCACAAAAATTCCAATAGCTGAGGGTACTTGCTCAGATGGCTTAGGTAGAACATCGGTGAAAGGTAAAATTGTTTTGTGCGAATCACGGGGATTTGAAGGTTCAGTTTCTCAACGTGGTGCATATGGTATAGTATCAAATGTTGAAGAGTCTCTAAATGACGTGGCTTTTGTCTCTGGGAATGCCAATCCACCACTAGCCGTTAACCCAGGACTTATTTATAACATCACAAAGGATGATTATGTGCAAATGCTTTGCAATTATGGTTACGATGATGAAAAAATTAAACAAATTAGTGGCGAAAACTCAAGATGTCGTGGAACTTCTAACCCATCATTAGTAAAAGATCTAAATTATCCTGCACTAGTGATTAATGTTGTGCCTCAAAAACAATTCAATATCAAGTTTCCTAGAACTGTTACCAATGTTGGTTCTCCTACTGCAACCTACAAGGCTATTGTCACTCCAATTCCAAATGTCAAGATTACTGTAGCGCCAAGTCTTCTCTCATTCAAATCATTGAATGAGAAACAATCATTTGTCGTCACAGTTGTTGGGAGTGTAGGATCAAGTCAAACTGAGTTTTCTTCGTCACTTGTTTGGTCAGATGGCACCCACAATGTCAAGAGTCCAATCATCGTACAATTAACATCTTAA 1247 0.4034 LGPIPKKWKGVCKGGANFTCNNKLIGARFYGNTDSARDEGGHGTHTSSTAGGREVQGVSFFDLAKGTARGGVPSSRIAMYKICGSDGKCSSASILGAFDDAIADGVDIISLSVGGQDALDFLNDPIAIASFHAMENGVLTSHSAGNSGPGVSTTSSVAPWLFSVAATTIDRKFISKLILGNGKSFIGSSVNTFPSNGTKIPIAEGTCSDGLGRTSVKGKIVLCESRGFEGSVSQRGAYGIVSNVEESLNDVAFVSGNANPPLAVNPGLIYNITKDDYVQMLCNYGYDDEKIKQISGENSRCRGTSNPSLVKDLNYPALVINVVPQKQFNIKFPRTVTNVGSPTATYKAIVTPIPNVKITVAPSLLSFKSLNEKQSFVVTVVGSVGSSQTEFSSSLVWSDGTHNVKSPIIVQLTS* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4838 414 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 246 412 IPR045051 -
Psa4g4838 414 Pfam Subtilase family 28 244 IPR000209 GO:0006508|GO:0008236
Psa4g4838 414 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 1 243 - -
Psa4g4838 414 ProSiteProfiles Serine proteases, subtilase domain profile. 1 414 - -
Psa4g4838 414 Gene3D - 281 413 - -
Psa4g4838 414 Pfam Fibronectin type-III domain 312 410 IPR041469 -
Psa4g4838 414 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 243 IPR045051 -
Psa4g4838 414 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 246 412 - -
Psa4g4838 414 Gene3D Peptidase S8/S53 domain 1 205 IPR036852 GO:0004252|GO:0006508
Psa4g4838 414 SUPERFAMILY Subtilisin-like 16 202 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4838 Psa-Chr4 420042072 420043768 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4838 248 413 Subtilisin-like Serine Gene Family AT3G46840 42.771 1.22e-36 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4838 - - mtr:MTR_6g055410 315.849