Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4832 ATGGAGACAACTTTTATTTCTTCCAAAGAAGAGATTATTGATTTGAACCAAATCACACTCCGACCCTTTCATCTCTCAGACCTTGATGATCTCATGGTAATAACTACTGATAAAAAAGTGGCCAATTTCTGTTCTTGGAAACCTTACACAAGCAAAGACCAAGGCGTCAACTTCATTGAAAATACACCAACCAAGTTTCTATGGTGCAAAGCAATATGTCTTAGCGATCGCGCTATTGGACGTATTTCACTGAAATCAAGATCACCACATGATAAAAGCAGGAACAAAACTGCAGAACTTGGTTATGTTCTAGCCTCTAAATATTGGGGTAAAGGGATTGCCACATGTGCTGTGAAACAAGTTCTTAAGGTTGTTTTCAATGAACTGTCACACTTGGAAAGGGTTGAAGCTTTTGTTGATACTGAAAATGTTGGGTCTCAGAGAGTTTTGGAGAAAGCAGGCTTCCAAAAGGAAGGAGTTCTGAGGAAGTATCTGTTCATGAAAGGAAAAAATAGAGACATGATCATGTTCAGTGTTCTTTCTAGTGATCTCCAATTATGA 561 0.3832 METTFISSKEEIIDLNQITLRPFHLSDLDDLMVITTDKKVANFCSWKPYTSKDQGVNFIENTPTKFLWCKAICLSDRAIGRISLKSRSPHDKSRNKTAELGYVLASKYWGKGIATCAVKQVLKVVFNELSHLERVEAFVDTENVGSQRVLEKAGFQKEGVLRKYLFMKGKNRDMIMFSVLSSDLQL* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4832 186 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 10 184 - -
Psa4g4832 186 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 18 173 IPR000182 GO:0016407
Psa4g4832 186 Gene3D - 10 186 - -
Psa4g4832 186 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 10 184 - -
Psa4g4832 186 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 16 180 IPR016181 -
Psa4g4832 186 Pfam Acetyltransferase (GNAT) domain 18 156 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4832 Psa-Chr4 419871945 419872505 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Psa4g4832 Acetyltransf_3 5.3e-28 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4832 - - mtr:MTR_5g006520 313.923