Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4819 ATGACAAAGGTCTTGGTCCCATTCCCAAAAAGTGGAAGGGAGTTTGTAAAGGCGGTGCTAACTTCACTTGCAACAAGAAAGTTATTGGAGCACGGCACCGCAAGGGGTGGAGTCCCATCTTCAAGGATTGCTGTATACAAGTTATGTGGCGCGGATGGTGCATGCACCGGTAATAATATCTTAGCTGCATTTGATGATGCAATTGCTGACGGAGTTGACATCATCACAATCTCAATTGGGAGCGATGCTCCTCTTGAGTTTTTTAACGATCCTATTGCTATTGCTTCTTTTCATGCCGTGGAGAAAGGAATACTTGTATCACATTCGGCGGGAAACTCTGGTCCTAGCCCAAGTTCTACTTCAAGTGTAGCACCTTGGTTATTTAGTGTTGCTGCAACTACCATAGATCGTCAATTCATTGATAAGCTCGTTCTTGGAAATGGAAAGACTCTCGTTGGTAGGTCGGTAAATACTTTCCCTTCAAATGGCACAAAAATTTCAATAGCTAAGGATTCTTGCTCTGAAGGCTTTGACGAAACAGTGGTCAAAGGAAAGATTGTTTTGTGTGAATTATCGGGGTTTGAAGAATCTGCTTTTCAAAGTGGTGCATTTGGTATAGTCTCAAGTGTTGAACTAAATGACGTTTCTTTTGTAACACAAATGCCTTCGGTTAACCTTGATTCAAAAGACTATGTTCTTGTTCAATCTTACACAAATTCCACTAAATCCCCTGTAGCTGAAATTTTGAAGAGTGAGATCTTCCATGACACGACTTCTCCTAGAGTTGCTTCTTTCTCTTCTCGTGGGCCATAA 813 0.417 MTKVLVPFPKSGREFVKAVLTSLATRKLLEHGTARGGVPSSRIAVYKLCGADGACTGNNILAAFDDAIADGVDIITISIGSDAPLEFFNDPIAIASFHAVEKGILVSHSAGNSGPSPSSTSSVAPWLFSVAATTIDRQFIDKLVLGNGKTLVGRSVNTFPSNGTKISIAKDSCSEGFDETVVKGKIVLCELSGFEESAFQSGAFGIVSSVELNDVSFVTQMPSVNLDSKDYVLVQSYTNSTKSPVAEILKSEIFHDTTSPRVASFSSRGP* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4819 270 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.5 29 270 - -
Psa4g4819 270 CDD PA_subtilisin_like 143 248 - -
Psa4g4819 270 Pfam Subtilase family 34 270 IPR000209 GO:0006508|GO:0008236
Psa4g4819 270 Gene3D - 136 255 - -
Psa4g4819 270 Gene3D Peptidase S8/S53 domain 29 270 IPR036852 GO:0004252|GO:0006508
Psa4g4819 270 ProSiteProfiles Serine proteases, subtilase domain profile. 1 270 - -
Psa4g4819 270 SUPERFAMILY Subtilisin-like 28 270 IPR036852 GO:0004252|GO:0006508
Psa4g4819 270 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 270 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4819 Psa-Chr4 419596546 419597819 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4819 8 270 Subtilisin-like Serine Gene Family AT3G46840 48.443 7.22e-72 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4819 - - lja:Lj3g3v0549610.1 256.529