Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4764 ATGAAAAAAACAGGTAGCAGTGTCTGTTTGCTGTTACTACTTCACATTTATCTGAGCATTGTGGTGACAAATTCAGCACCAGAAAGTGCCATTGTAACTCAGATTCCAGGTTTCAATGGAACAATACCTTCCAAGCATTATGCTGGGTATGTAACTGTGGATGAAAGTCATGGAAGAAATTTGTATTACTATTTTGTTGAATCAGAAAGTAAACCTTCTCAGGATCCGGTTGTTCTTTGGCTTAATGGTGGACCTGGTTGCTCTAGCTTTGATGGTTTCATCTATGAACATGGTCCTTTTAATTTTGAAGCAGCAAAGAGTAAGGGAGGCCTGCCAACTCTGCATCTCAATCCATACAGCTGGACCAAGGTTTCCAGTATTATATATTTGGACTCTCCGGCTGGTGTTGGATTTTCATACTCTAAGAATGAAACTGATTATGTAACTGGAGACATAAAGACTGCGTCTGATTCGCATGTCTTTCTCCTTAAGTGGTTTGAACTATATCCCGAGTTCCTTTCCAATCCTTTCTTCATTGCTGGAGAGTCATATGCCGGAGTTTATGTGCCTACTCTTGCCTATGAAGTAATGAAAGGAATTGATGCGGATGTGAAGCCCAAACTGAATTTTAAGGGTTACATTGTTGGAAATGGTGTTACAGATGAACTAATCGATGGCAATGCTCTTGTTCCATTTGTACATGGGATGGGTCTTATCCCGGATGAATTGTTTGAGGAGGCTAATCGCGAGTGTAATGGGAATTTCTATAATTCGCTCAGTGATAATTGTACAGACAGGCTTACCAAAATTGATGAGGACATTGCCGGGTTAAACATATATAACATTCTAGAACCATGCTATCATGGCACTGAGGCGGACAAGATTATCACTACTTATGTTAAGTTGCCGTCTAGTTTCCGGAAGTTAGGTGAGACTGAGAAACCTCATCTTGTGAGGAAAAGAATGTTCGGCCGTGCTTGGCCCCTAAGAGCACCTGTCAGAGACGGAATTGTACCCACTTGGCCGCAACTTACCAGTAGCAACAATGTTCCATGCGTAGACGGCACCGTTGCAGACGTATGGTTGAACAATGAAGAAGTCAGGAAAGCAATTCACACTGCAGAGAAAAGTGTGGTCAGTAGTTGGGATTTATGCACAGACAAAATTTCCTTCGATCATGACGCTGGAAGCATGATTAAGTACCACAAGAACCTAACTTCCAAAGGATACCGAGCTCTTATATTCAGCGGTGATCATGACATGTGTGTTCCATTTACGGGGAGTCAAGCATGGACGAGATCAATCGGATACAAGATTGTTGATGAATGGAGACCTTGGTTATCCAATGGTCAAGTTGTTGGCTTTACTCAAGGATATGACAACAATCTTACTTTTCTGACCATAAAGGGAGCTGGGCATACTGTTCCGGAATATAAGCCACAAGAAGCATTGGAATTTTACAAACGTTTTCTTGCTGGATTGCCAATATGA 1491 0.4172 MKKTGSSVCLLLLLHIYLSIVVTNSAPESAIVTQIPGFNGTIPSKHYAGYVTVDESHGRNLYYYFVESESKPSQDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAAKSKGGLPTLHLNPYSWTKVSSIIYLDSPAGVGFSYSKNETDYVTGDIKTASDSHVFLLKWFELYPEFLSNPFFIAGESYAGVYVPTLAYEVMKGIDADVKPKLNFKGYIVGNGVTDELIDGNALVPFVHGMGLIPDELFEEANRECNGNFYNSLSDNCTDRLTKIDEDIAGLNIYNILEPCYHGTEADKIITTYVKLPSSFRKLGETEKPHLVRKRMFGRAWPLRAPVRDGIVPTWPQLTSSNNVPCVDGTVADVWLNNEEVRKAIHTAEKSVVSSWDLCTDKISFDHDAGSMIKYHKNLTSKGYRALIFSGDHDMCVPFTGSQAWTRSIGYKIVDEWRPWLSNGQVVGFTQGYDNNLTFLTIKGAGHTVPEYKPQEALEFYKRFLAGLPI* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4764 496 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
Psa4g4764 496 Gene3D alpha/beta hydrolase 24 320 IPR029058 -
Psa4g4764 496 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 18 493 IPR001563 GO:0004185|GO:0006508
Psa4g4764 496 ProSitePatterns Serine carboxypeptidases, histidine active site. 463 480 IPR033124 GO:0004185
Psa4g4764 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185|GO:0006508
Psa4g4764 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185|GO:0006508
Psa4g4764 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Psa4g4764 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 463 476 IPR001563 GO:0004185|GO:0006508
Psa4g4764 496 Pfam Serine carboxypeptidase 36 492 IPR001563 GO:0004185|GO:0006508
Psa4g4764 496 SUPERFAMILY alpha/beta-Hydrolases 32 495 IPR029058 -
Psa4g4764 496 Gene3D - 348 495 - -
Psa4g4764 496 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 18 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4764 Psa-Chr4 418340205 418343030 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4764 357 496 Calmodulin-binding Proteins AT2G22960 46.429 9.67e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4764 K16296 - gmx:100792057 875.544