Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4735 ATGAACGGCAGCGAAAACAACCAAACCGAAACAGTAAAATCACTAGATTTCAGAAAACTAAAAGTCGTATCCGCCGTAGGACGCGGCGCCAAGGGCGTCGTTTTTCTCGCTCGAACCGGTAACCGGTCTTCAGACGAGTGCCTTGCTCTGAAAGTAACATCAAAAGCTCTTATACATCAAAAGAAAGCAAAGAACAATTCAAAAGGCTCTGGAGAGTACAAGAGATCGTCGTTTGAAGAAGAAGTGCTACGTCGTTTCGATCATCCACTTTTGCCACGGTTGCGAGGTGTTTTCGAAACCGAGAAAATCGTTGGATTCGCCATTGATTATTGCCATGGCGGTAACCTCCATTCTCTCAGAAAGAAACAAACTGAGAAAATGTTCTCGGATGACGCCATTAGGTTTTACGCTGCTGAATTGGTTCTTGCATTGGAGTATCTTCATAATTTAGGAATAGTGTATAGAGATTTGAAACCAGAGAACGTGATGATTCAAGAAAACGGTCACATAATGCTTGTAGATTTCGATCTATCTACGAAGCTGAAACCTAAATCGCCACCTCAGTCACTGAGTAATAACTCGTCGGTTAGATCTAGCCTTTCAAAAGAGAAACACGCGAGGAAGCGGTTGATTTCGAGATTCTACCGATGTAACTCGGGGATCTCGCCGTGTGACTCGGATTTTGACTCGCAACCTGGTGTGAACTCAGTGAGTAGAAACGAGTCGGGATCTGTTGAATCTGTTGAAAAATCGAACTCGTTCGTTGGAACGGAAGATTACGTGGCACCTGAAATCGTACTTGGAAAAGGTCACGGTTTCGAAGTTGATTGGTGGTCGTTAGGTGTCGTTTTACACGAGATGTTGTATGGAACGACGCCGTTTAACGGGACGAATAGGAAAGAAACGTTTTACAGGATTTTGTCAAAGGAACCTGAGTTAACGGGAGAGAAAACAGCGTTAAGGGACTTGATTCGTAAATTGTTGGAAAAGGATCCTGACCGTAGGATCAGGCTGGATGAAATCAAGGGTCATGATTTCTTTAAAGGAGTTATGTGGGACAGGGTGGTTGAATTGGCAAGACCACCTTATATTCCTTGTATTGAAGTTGAGAATGAGAATACGAAAGGGTATAGTAAAAAATATGTGGAGGTTTTTGTTCATGAAGTGTTTTTTCCGTGTGGTGATGATAATAATGAAGAGAAAAAGAATAAAATGGAAGATAAGAGGATTAACGGTGAGGATAAAACAGGGTGGGTTGATAAATTGAGTACTAGTCTCAATGAGAATGAGGATTTTTTAATTTTTTGA 1308 0.4182 MNGSENNQTETVKSLDFRKLKVVSAVGRGAKGVVFLARTGNRSSDECLALKVTSKALIHQKKAKNNSKGSGEYKRSSFEEEVLRRFDHPLLPRLRGVFETEKIVGFAIDYCHGGNLHSLRKKQTEKMFSDDAIRFYAAELVLALEYLHNLGIVYRDLKPENVMIQENGHIMLVDFDLSTKLKPKSPPQSLSNNSSVRSSLSKEKHARKRLISRFYRCNSGISPCDSDFDSQPGVNSVSRNESGSVESVEKSNSFVGTEDYVAPEIVLGKGHGFEVDWWSLGVVLHEMLYGTTPFNGTNRKETFYRILSKEPELTGEKTALRDLIRKLLEKDPDRRIRLDEIKGHDFFKGVMWDRVVELARPPYIPCIEVENENTKGYSKKYVEVFVHEVFFPCGDDNNEEKKNKMEDKRINGEDKTGWVDKLSTSLNENEDFLIF* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4735 435 SMART serkin_6 20 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g4735 435 Gene3D Transferase(Phosphotransferase) domain 1 243 366 - -
Psa4g4735 435 PANTHER FLIPPASE KINASE 1-RELATED 9 410 - -
Psa4g4735 435 MobiDBLite consensus disorder prediction 228 249 - -
Psa4g4735 435 SUPERFAMILY Protein kinase-like (PK-like) 20 370 IPR011009 -
Psa4g4735 435 Gene3D Phosphorylase Kinase; domain 1 20 114 - -
Psa4g4735 435 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 9 410 - -
Psa4g4735 435 MobiDBLite consensus disorder prediction 184 204 - -
Psa4g4735 435 MobiDBLite consensus disorder prediction 184 199 - -
Psa4g4735 435 ProSiteProfiles Protein kinase domain profile. 20 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g4735 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Psa4g4735 435 Pfam Protein kinase domain 246 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g4735 435 Pfam Protein kinase domain 22 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g4735 435 Gene3D Transferase(Phosphotransferase) domain 1 115 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4735 Psa-Chr4 417515478 417519952 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4735 12 398 AGC Kinase Gene Family AT4G13000 58.656 4.86e-150 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Psa4g4735 Pkinase 2.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4735 K20714 - gmx:100785773 549.28