Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4721 ATGGGTATTTCCAGGGATTCTATGCACAAGAGGCGTGAGACTGGAGGAAAGAAGAAGGCATGGAGGAAGAAGAGAAAGTACGAGCTTGGTCGCCAGCCAGCTAACACCAAGCTTTCAAGCAACAAGACCGTAAGGAGGATCCGTGTCCGTGGTGGTAATGTTAAATGGAGGGCTTTGAGGTTGGATACAGGAAACTTTTCCTGGCCTAGTGAAACTGTCACCCGTAAGACCCGTCTCCTTGATGTGGTTTACAATGCCTCCAACAATGAGCTTGTGCGTACTCAGACCCTTGTGAAGAGTGCCATTGTTCAGGTTGATGCTGCCCCTTTCAAGCAATGGTACCTTCAACACTATGGTGTTGAAATTGGAAGGAAAAAGAAAACTGCCGGCAAGAAAGAGTCTGAGGAGGCTGAAGCTGTTACAGAGGAAGTTAAAAAGAGTAGCCATGTTCAGAGGAAATTAGAACAACGACAGAAGGACCGTCAGCTGGATCCACACATTGAGGAGCAGTTTGGAGGTGGAAGGTTGCTTGCATGCATTTCTTCCCGACCTGGACAGTGTGGCAGAGCTGATGGCTACATTTTGGAAGGTAGAGAATTGGAATTTTACATGAAGAAGCTCCAGAAGAAGAAGGGCAAGGGTGCTGCTTGA 651 0.4762 MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWPSETVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGRKKKTAGKKESEEAEAVTEEVKKSSHVQRKLEQRQKDRQLDPHIEEQFGGGRLLACISSRPGQCGRADGYILEGRELEFYMKKLQKKKGKGAA* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4721 216 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Psa4g4721 216 MobiDBLite consensus disorder prediction 1 35 - -
Psa4g4721 216 Pfam Ribosomal protein S8e 5 195 IPR022309 -
Psa4g4721 216 PANTHER 40S RIBOSOMAL PROTEIN S8 1 216 - -
Psa4g4721 216 CDD Ribosomal_S8e_like 5 195 - -
Psa4g4721 216 MobiDBLite consensus disorder prediction 127 165 - -
Psa4g4721 216 PANTHER 40S RIBOSOMAL PROTEIN S8 1 216 IPR001047 GO:0003735|GO:0005840|GO:0006412
Psa4g4721 216 Gene3D - 28 211 - -
Psa4g4721 216 TIGRFAM eS8: ribosomal protein eS8 1 197 IPR001047 GO:0003735|GO:0005840|GO:0006412
Psa4g4721 216 Gene3D Ribosomal protein S8e, subdomain 108 174 IPR042563 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4721 1 204 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 84.390 1.16e-124 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4721 K02995 - gmx:100794937 356.295