Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4717 ATGACCATGAAAAGAGGCGAGGTAGCTTTGTTGACTATCCCGCCTGAATATGCTTTTGGTTCATCAGAGTCTCAGCGGGAACTGGCAGTGGTTCCTCCTAATTCAACCTTGTACTATGAAGTTGAGCTAGTAACATTCATAAAGGATAAGGAGGTCGGGGACATGCTGAATGGCAAAGAAAGGATAGAAGCTGCTCTTAAGAAGGCAAAAGAAGCGAATGAATTGTACAGAGCTAAGAAATATGCAAGGGCTTCTAAACAATTATAG 267 0.4232 MTMKRGEVALLTIPPEYAFGSSESQRELAVVPPNSTLYYEVELVTFIKDKEVGDMLNGKERIEAALKKAKEANELYRAKKYARASKQL* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4717 88 Coils Coil 59 79 - -
Psa4g4717 88 Gene3D - 1 78 IPR046357 GO:0003755
Psa4g4717 88 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 1 47 IPR001179 GO:0003755
Psa4g4717 88 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 2 44 IPR001179 GO:0003755
Psa4g4717 88 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 66 - -
Psa4g4717 88 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP65 1 66 - -
Psa4g4717 88 SUPERFAMILY FKBP-like 2 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4717 Psa-Chr4 416533318 416533673 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4717 1 87 Calmodulin-binding Proteins AT5G48570 72.414 8.70e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4717 K09571 K01802 ath:AT5G48570 118.627